RNA–Protein interactions for RNA: ENST00000332397.6

SPDYE3-201, Transcript of speedy/RINGO cell cycle regulator family member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE3, Length 3,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3-201ENST00000332397 CNPY2Q9Y2B0 182 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 HSPA4P34932 840 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 ZNF445P59923 1031 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 POLA2Q14181 598 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
SPDYE3-201ENST00000332397 ADCY9O60503 1353 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 LARGE1O95461 756 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 SMC3Q9UQE7 1217 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 ANAPC15P60006 121 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 KCNH5Q8NCM2 988 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 CABLES1Q8TDN4 633 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 BICC1Q9H694 974 aaKnown RBP12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 TLR7Q9NYK1 1049 aaKnown RBP12.66□□□□□ -0.38
SPDYE3-201ENST00000332397 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 EDC3Q96F86 508 aaKnown RBP12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 SUCLG2Q96I99 432 aa12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 RAD50Q92878 1312 aa12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 GIGYF1O75420 1035 aaPredicted RBP12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 CUL4AQ13619 759 aa12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
SPDYE3-201ENST00000332397 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.39
SPDYE3-201ENST00000332397 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.39
SPDYE3-201ENST00000332397 RUFY3Q7L099 469 aa12.65□□□□□ -0.39
SPDYE3-201ENST00000332397 FERMT3Q86UX7 667 aa12.65□□□□□ -0.39
SPDYE3-201ENST00000332397 ZSCAN30Q86W11 494 aa12.65□□□□□ -0.39
SPDYE3-201ENST00000332397 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.39
SPDYE3-201ENST00000332397 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 MBD3O95983 291 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 STK3Q13188 491 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
SPDYE3-201ENST00000332397 COL9A3Q14050 684 aaPredicted RBP12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 MYD88Q99836 296 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 ARID3AQ99856 593 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 PDRG1Q9NUG6 133 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 PROSER2Q86WR7 435 aaPredicted RBP12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 PXDNQ92626 1479 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 ARHGAP23Q9P227 1491 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 ANKARQ7Z5J8 1434 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 GRM8O00222 908 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 TSPY26PQ9H489 355 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 LIMCH1Q9UPQ0 1083 aa12.63□□□□□ -0.39
SPDYE3-201ENST00000332397 SYT1P21579 422 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 FAM173BQ6P4H8 233 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 R3HCC1Q9Y3T6 440 aaKnown RBP12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 STX6O43752 255 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 GJB2P29033 226 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 FOSBP53539 338 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 ARHGEF25Q86VW2 580 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 INTS4Q96HW7 963 aaKnown RBP12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 SLIT1O75093 1534 aa12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
SPDYE3-201ENST00000332397 CHGBP05060 677 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 DDX58O95786 925 aaKnown RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 CYP46A1Q9Y6A2 500 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 AOX1Q06278 1338 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 ZNF830Q96NB3 372 aaPredicted RBP12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
SPDYE3-201ENST00000332397 SASH1O94885 1247 aa12.6□□□□□ -0.39
SPDYE3-201ENST00000332397 NEXNQ0ZGT2 675 aa12.6□□□□□ -0.39
SPDYE3-201ENST00000332397 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
SPDYE3-201ENST00000332397 USP25Q9UHP3 1055 aa12.6□□□□□ -0.39
SPDYE3-201ENST00000332397 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
SPDYE3-201ENST00000332397 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
SPDYE3-201ENST00000332397 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms