RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ATP2C2O75185 946 aa12.22□□□□□ -0.45
CLN8-201ENST00000331222 CHRNA2Q15822 529 aa12.22□□□□□ -0.45
CLN8-201ENST00000331222 FAM107BQ9H098 131 aa12.22□□□□□ -0.45
CLN8-201ENST00000331222 MICU3Q86XE3 530 aa12.21□□□□□ -0.45
CLN8-201ENST00000331222 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
CLN8-201ENST00000331222 ANKRD18BA2A2Z9 1011 aa12.21□□□□□ -0.45
CLN8-201ENST00000331222 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
CLN8-201ENST00000331222 MAP3K2Q9Y2U5 619 aa12.21□□□□□ -0.45
CLN8-201ENST00000331222 KIF5CO60282 957 aa12.21□□□□□ -0.46
CLN8-201ENST00000331222 BAG4O95429 457 aaKnown RBP12.21□□□□□ -0.46
CLN8-201ENST00000331222 CCDC40Q4G0X9 1142 aa12.21□□□□□ -0.46
CLN8-201ENST00000331222 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.46
CLN8-201ENST00000331222 BIN2Q9UBW5 565 aaPredicted RBP12.21□□□□□ -0.46
CLN8-201ENST00000331222 SSX2IPQ9Y2D8 614 aa12.21□□□□□ -0.46
CLN8-201ENST00000331222 HMGXB3Q12766 1538 aa12.21□□□□□ -0.46
CLN8-201ENST00000331222 TMEM67Q5HYA8 995 aa12.21□□□□□ -0.46
CLN8-201ENST00000331222 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 CUX1P39880 1505 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 A0A087WZG4 1122 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 CEBPAP49715 358 aaPredicted RBP12.2□□□□□ -0.46
CLN8-201ENST00000331222 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 KRT32Q14532 448 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
CLN8-201ENST00000331222 ARID5AQ03989 594 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 UBXN4Q92575 508 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 KAT14Q9H8E8 782 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 STX8Q9UNK0 236 aa12.2□□□□□ -0.46
CLN8-201ENST00000331222 ANXA1P04083 346 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
CLN8-201ENST00000331222 EXOC5O00471 708 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 FAM170AA1A519 330 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 PPP1R14CQ8TAE6 165 aa12.19□□□□□ -0.46
CLN8-201ENST00000331222 CALM1P0DP23 149 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 CALM2P0DP24 149 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 CALM3P0DP25 149 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 TMPOP42166 694 aaKnown RBP12.18□□□□□ -0.46
CLN8-201ENST00000331222 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 AFMP43652 599 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 PHACTR2O75167 634 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 ST5P78524 1137 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 RAB11FIP3O75154 756 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 MAATS1Q7Z4T9 603 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 FBLN1P23142 703 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 TMC6Q7Z403 805 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 HEATR3Q7Z4Q2 680 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
CLN8-201ENST00000331222 MX1P20591 662 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 NME9Q86XW9 330 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 C16orf45Q96MC5 204 aaPredicted RBP12.17□□□□□ -0.46
CLN8-201ENST00000331222 NAIPQ13075 1403 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 GCOM1H8Y6P7 765 aaPredicted RBP12.17□□□□□ -0.46
CLN8-201ENST00000331222 MYZAPP0CAP1 466 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 RAB34Q9BZG1 259 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 FGD6Q6ZV73 1430 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 LDHAL6AQ6ZMR3 332 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 PTGS1P23219 599 aa12.17□□□□□ -0.46
CLN8-201ENST00000331222 SYNJ1O43426 1573 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 TSPY3P0CV98 308 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 TSPY8P0CW00 308 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
CLN8-201ENST00000331222 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 FERP16591 822 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLN8-201ENST00000331222 NFE2L2Q16236 605 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 TSNARE1Q96NA8 513 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 PRXQ9BXM0 1461 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 SH3BP5O60239 455 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
CLN8-201ENST00000331222 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
CLN8-201ENST00000331222 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
CLN8-201ENST00000331222 FGFR1OPO95684 399 aaKnown RBP12.15□□□□□ -0.46
CLN8-201ENST00000331222 PSMC4P43686 418 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 SETD1BQ9UPS6 1966 aaKnown RBP12.15□□□□□ -0.46
CLN8-201ENST00000331222 CCDC174Q6PII3 467 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 CFTRP13569 1480 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 HLA-DOAP06340 250 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms