RNA–Protein interactions for RNA: ENST00000331173.5

CSTF2T-201, Transcript of cleavage stimulation factor subunit 2 tau variant, humanhuman

APPRIS P1 BASIC

Gene CSTF2T, Length 4,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2T-201ENST00000331173 TRIM29Q14134 588 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 TSR1Q2NL82 804 aaKnown RBP9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 LARP1BQ659C4 914 aaKnown RBP9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 TRDNQ13061 729 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 IL1RAPL2Q9NP60 686 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 CPDO75976 1380 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 KAT6BQ8WYB5 2073 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 SSH2Q76I76 1423 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 A0A0U1RQG5 324 aaPredicted RBP9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 HDGFL1Q5TGJ6 251 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 ZMYND15Q9H091 742 aa9.67□□□□□ -0.86
CSTF2T-201ENST00000331173 AKAP4Q5JQC9 854 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 MCM10Q7L590 875 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 HIP1O00291 1037 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 RLBP1P12271 317 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 MCM5P33992 734 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 HOOK1Q9UJC3 728 aaKnown RBP9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 SMARCA5O60264 1052 aaPredicted RBP9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 MTHFSDQ2M296 383 aaKnown RBP9.66□□□□□ -0.86
CSTF2T-201ENST00000331173 ROBO1Q9Y6N7 1651 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 PXDNQ92626 1479 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 RXRBP28702 533 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 AKAP17AQ02040 695 aaKnown RBP9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 PDCL2Q8N4E4 241 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 NOC3LQ8WTT2 800 aaKnown RBP9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 RBM42Q9BTD8 480 aaKnown RBP9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 NUP62CLQ9H1M0 184 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 THRAP3Q9Y2W1 955 aaKnown RBP9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 USP32Q8NFA0 1604 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 NUCB1Q02818 461 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 AIMP1Q12904 312 aaKnown RBP9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 SNX21Q969T3 373 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 PHACTR3Q96KR7 559 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 USP25Q9UHP3 1055 aa9.65□□□□□ -0.86
CSTF2T-201ENST00000331173 RGPD8O14715 1765 aaPredicted RBP9.65□□□□□ -0.87
CSTF2T-201ENST00000331173 BTBD11A6QL63 1104 aa9.65□□□□□ -0.87
CSTF2T-201ENST00000331173 IPO7O95373 1038 aaKnown RBP9.65□□□□□ -0.87
CSTF2T-201ENST00000331173 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.87
CSTF2T-201ENST00000331173 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 MAP4K4O95819 1239 aaPredicted RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 APPP05067 770 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 TAF7Q15545 349 aaPredicted RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 RALYLQ86SE5 291 aaKnown RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 MX1P20591 662 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 ANKRD1Q15327 319 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 CWC27Q6UX04 472 aaKnown RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 NEUROD6Q96NK8 337 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 TNNQ9UQP3 1299 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 SMC2O95347 1197 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 ERC1Q8IUD2 1116 aa9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 JAKMIP1Q96N16 626 aaKnown RBP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.87
CSTF2T-201ENST00000331173 HMGB2P26583 209 aaKnown RBP9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 ZSCAN23Q3MJ62 389 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 CCDC183Q5T5S1 534 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 BLOC1S2Q6QNY1 142 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 MYOM1P52179 1685 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 PDIA4P13667 645 aaKnown RBP9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 FILIP1Q7Z7B0 1213 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 ANKRD20A12PQ8NF67 263 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 SPATA32Q96LK8 384 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 RRAGDQ9NQL2 400 aaPredicted RBP9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 CRB1P82279 1406 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 VPS72Q15906 364 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 MAP3K11Q16584 847 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 HSP90B2PQ58FF3 399 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 FERMT3Q86UX7 667 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 RBM6P78332 1123 aaKnown RBP9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 STK3Q13188 491 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 CCDC70Q6NSX1 233 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 PDRG1Q9NUG6 133 aa9.63□□□□□ -0.87
CSTF2T-201ENST00000331173 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 IL16Q14005 1332 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 RBM27Q9P2N5 1060 aaKnown RBP9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 DYNC1I1O14576 645 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 ME1P48163 572 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 SAFBQ15424 915 aaKnown RBP eCLIP9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 OLFM4Q6UX06 510 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 ACSBG1Q96GR2 724 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 PRDM10Q9NQV6 1147 aa9.62□□□□□ -0.87
CSTF2T-201ENST00000331173 KIF20BQ96Q89 1820 aa9.61□□□□□ -0.87
CSTF2T-201ENST00000331173 PTCD1O75127 700 aaKnown RBP9.61□□□□□ -0.87
CSTF2T-201ENST00000331173 RAB3GAP1Q15042 981 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms