RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LSG1Q9H089 658 aaKnown RBP18.55■□□□□ 0.56
BRCC3-201ENST00000330045 BTBD11A6QL63 1104 aa18.54■□□□□ 0.56
BRCC3-201ENST00000330045 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
BRCC3-201ENST00000330045 ANXA1P04083 346 aa18.54■□□□□ 0.56
BRCC3-201ENST00000330045 FOXD4L6Q3SYB3 417 aaPredicted RBP18.54■□□□□ 0.56
BRCC3-201ENST00000330045 FOXD4L3Q6VB84 417 aaPredicted RBP18.54■□□□□ 0.56
BRCC3-201ENST00000330045 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
BRCC3-201ENST00000330045 NOL7Q9UMY1 257 aaKnown RBP18.54■□□□□ 0.56
BRCC3-201ENST00000330045 TNS3Q68CZ2 1445 aa18.53■□□□□ 0.56
BRCC3-201ENST00000330045 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
BRCC3-201ENST00000330045 OS9Q13438 667 aaPredicted RBP18.52■□□□□ 0.56
BRCC3-201ENST00000330045 CWC27Q6UX04 472 aaKnown RBP18.52■□□□□ 0.56
BRCC3-201ENST00000330045 TTC14Q96N46 770 aa18.52■□□□□ 0.56
BRCC3-201ENST00000330045 TTC41PQ6P2S7 1318 aa18.52■□□□□ 0.56
BRCC3-201ENST00000330045 USP42Q9H9J4 1324 aaKnown RBP18.52■□□□□ 0.56
BRCC3-201ENST00000330045 ADCY9O60503 1353 aa18.52■□□□□ 0.56
BRCC3-201ENST00000330045 GLRX3O76003 335 aaKnown RBP18.52■□□□□ 0.56
BRCC3-201ENST00000330045 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
BRCC3-201ENST00000330045 GDPD2Q9HCC8 539 aa18.52■□□□□ 0.56
BRCC3-201ENST00000330045 ERBB3P21860 1342 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 OFD1O75665 1012 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 USP48Q86UV5 1035 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 DBF4Q9UBU7 674 aaPredicted RBP18.51■□□□□ 0.55
BRCC3-201ENST00000330045 AK2P54819 239 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 MTX1Q13505 466 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
BRCC3-201ENST00000330045 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
BRCC3-201ENST00000330045 GADD45BO75293 160 aaPredicted RBP18.5■□□□□ 0.55
BRCC3-201ENST00000330045 TPM2P07951 284 aa18.5■□□□□ 0.55
BRCC3-201ENST00000330045 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
BRCC3-201ENST00000330045 RNF214Q8ND24 703 aa18.5■□□□□ 0.55
BRCC3-201ENST00000330045 LIMCH1Q9UPQ0 1083 aa18.5■□□□□ 0.55
BRCC3-201ENST00000330045 SPG7Q9UQ90 795 aa18.5■□□□□ 0.55
BRCC3-201ENST00000330045 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
BRCC3-201ENST00000330045 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.49■□□□□ 0.55
BRCC3-201ENST00000330045 RUFY2Q8WXA3 655 aa18.49■□□□□ 0.55
BRCC3-201ENST00000330045 DIAPH3Q9NSV4 1193 aa18.49■□□□□ 0.55
BRCC3-201ENST00000330045 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
BRCC3-201ENST00000330045 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
BRCC3-201ENST00000330045 PHF14O94880 888 aa18.49■□□□□ 0.55
BRCC3-201ENST00000330045 C9orf78Q9NZ63 289 aaPredicted RBP18.49■□□□□ 0.55
BRCC3-201ENST00000330045 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.49■□□□□ 0.55
BRCC3-201ENST00000330045 ZNF500O60304 480 aaPredicted RBP18.48■□□□□ 0.55
BRCC3-201ENST00000330045 ALDH1L1O75891 902 aa18.48■□□□□ 0.55
BRCC3-201ENST00000330045 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
BRCC3-201ENST00000330045 RUFY3Q7L099 469 aa18.48■□□□□ 0.55
BRCC3-201ENST00000330045 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
BRCC3-201ENST00000330045 MAP3K2Q9Y2U5 619 aa18.48■□□□□ 0.55
BRCC3-201ENST00000330045 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
BRCC3-201ENST00000330045 TMEM87AQ8NBN3 555 aa18.48■□□□□ 0.55
BRCC3-201ENST00000330045 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 ZSCAN22P10073 491 aaPredicted RBP18.47■□□□□ 0.55
BRCC3-201ENST00000330045 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
BRCC3-201ENST00000330045 ECHDC1Q9NTX5 307 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 ZKSCAN5Q9Y2L8 839 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 CASTP20810 708 aaKnown RBP18.47■□□□□ 0.55
BRCC3-201ENST00000330045 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 UBE2Q2Q8WVN8 375 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 HDAC5Q9UQL6 1122 aa18.47■□□□□ 0.55
BRCC3-201ENST00000330045 STX6O43752 255 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 KSR2Q6VAB6 950 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 SMC3Q9UQE7 1217 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 GIGYF1O75420 1035 aaPredicted RBP18.46■□□□□ 0.55
BRCC3-201ENST00000330045 IFIT2P09913 472 aaKnown RBP18.46■□□□□ 0.55
BRCC3-201ENST00000330045 SYT1P21579 422 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 HSP90AA2PQ14568 343 aaPredicted RBP18.46■□□□□ 0.55
BRCC3-201ENST00000330045 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 COL18A1P39060 1754 aa18.46■□□□□ 0.55
BRCC3-201ENST00000330045 RRP9O43818 475 aaKnown RBP18.45■□□□□ 0.54
BRCC3-201ENST00000330045 MCM5P33992 734 aa18.45■□□□□ 0.54
BRCC3-201ENST00000330045 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
BRCC3-201ENST00000330045 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
BRCC3-201ENST00000330045 CPA1P15085 419 aa18.45■□□□□ 0.54
BRCC3-201ENST00000330045 PTH1RQ03431 593 aa18.45■□□□□ 0.54
BRCC3-201ENST00000330045 PROSER3Q2NL68 480 aa18.45■□□□□ 0.54
BRCC3-201ENST00000330045 HYPKQ9NX55 129 aa18.45■□□□□ 0.54
BRCC3-201ENST00000330045 SOS2Q07890 1332 aaPredicted RBP18.45■□□□□ 0.54
BRCC3-201ENST00000330045 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
BRCC3-201ENST00000330045 TCHHQ07283 1943 aa18.44■□□□□ 0.54
BRCC3-201ENST00000330045 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
BRCC3-201ENST00000330045 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
BRCC3-201ENST00000330045 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 PRPF40BQ6NWY9 871 aaKnown RBP18.43■□□□□ 0.54
BRCC3-201ENST00000330045 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
BRCC3-201ENST00000330045 SIPA1L3O60292 1781 aaPredicted RBP18.43■□□□□ 0.54
BRCC3-201ENST00000330045 F13A1P00488 732 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 CCDC183Q5T5S1 534 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 TM6SF1Q9BZW5 370 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 ATP6V1DQ9Y5K8 247 aa18.43■□□□□ 0.54
BRCC3-201ENST00000330045 LARGE1O95461 756 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 TERF1P54274 439 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 ADCK5Q3MIX3 580 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 AACSQ86V21 672 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms