RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 SRGNP10124 158 aa23.39■■□□□ 1.33
PTPMT1-201ENST00000326656 TPTE2Q6XPS3 522 aa23.39■■□□□ 1.33
PTPMT1-201ENST00000326656 MIS18AQ9NYP9 233 aa23.39■■□□□ 1.33
PTPMT1-201ENST00000326656 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
PTPMT1-201ENST00000326656 RASSF7Q02833 373 aa23.38■■□□□ 1.33
PTPMT1-201ENST00000326656 FSTL1Q12841 308 aa23.38■■□□□ 1.33
PTPMT1-201ENST00000326656 NBPF5PQ86XG9 351 aaPredicted RBP23.38■■□□□ 1.33
PTPMT1-201ENST00000326656 MASTLQ96GX5 879 aa23.38■■□□□ 1.33
PTPMT1-201ENST00000326656 TNRC6CQ9HCJ0 1690 aaKnown RBP23.38■■□□□ 1.33
PTPMT1-201ENST00000326656 GLTPD2A6NH11 291 aa23.37■■□□□ 1.33
PTPMT1-201ENST00000326656 NFKBIEO00221 500 aa23.37■■□□□ 1.33
PTPMT1-201ENST00000326656 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
PTPMT1-201ENST00000326656 LTBP3Q9NS15 1303 aa23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 CCDC24Q8N4L8 307 aa23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 RRAGCQ9HB90 399 aa23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 LAMB4A4D0S4 1761 aa23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 KDM3BQ7LBC6 1761 aa23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 CCDC88AQ3V6T2 1871 aa23.36■■□□□ 1.33
PTPMT1-201ENST00000326656 KLRG2A4D1S0 409 aaPredicted RBP23.35■■□□□ 1.33
PTPMT1-201ENST00000326656 ERVV-1B6SEH8 477 aa23.35■■□□□ 1.33
PTPMT1-201ENST00000326656 C21orf2O43822 256 aa23.35■■□□□ 1.33
PTPMT1-201ENST00000326656 PRELPP51888 382 aa23.35■■□□□ 1.33
PTPMT1-201ENST00000326656 NIP7Q9Y221 180 aaKnown RBP eCLIP23.35■■□□□ 1.33
PTPMT1-201ENST00000326656 COL11A2P13942 1736 aaPredicted RBP23.35■■□□□ 1.33
PTPMT1-201ENST00000326656 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
PTPMT1-201ENST00000326656 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
PTPMT1-201ENST00000326656 VEGFAP15692 232 aaPredicted RBP23.33■■□□□ 1.33
PTPMT1-201ENST00000326656 NPR1P16066 1061 aa23.33■■□□□ 1.33
PTPMT1-201ENST00000326656 DPY19L2Q6NUT2 758 aa23.32■■□□□ 1.32
PTPMT1-201ENST00000326656 PRPF40BQ6NWY9 871 aaKnown RBP23.32■■□□□ 1.32
PTPMT1-201ENST00000326656 ARFGEF2Q9Y6D5 1785 aa23.32■■□□□ 1.32
PTPMT1-201ENST00000326656 ERBB4Q15303 1308 aa23.32■■□□□ 1.32
PTPMT1-201ENST00000326656 DICER1Q9UPY3 1922 aaKnown RBP23.31■■□□□ 1.32
PTPMT1-201ENST00000326656 THUMPD2Q9BTF0 503 aaKnown RBP23.31■■□□□ 1.32
PTPMT1-201ENST00000326656 TAOK3Q9H2K8 898 aa23.31■■□□□ 1.32
PTPMT1-201ENST00000326656 SLX4Q8IY92 1834 aa23.31■■□□□ 1.32
PTPMT1-201ENST00000326656 RIPK4P57078 832 aa23.3■■□□□ 1.32
PTPMT1-201ENST00000326656 LMOD3Q0VAK6 560 aa23.3■■□□□ 1.32
PTPMT1-201ENST00000326656 HLFQ16534 295 aa23.3■■□□□ 1.32
PTPMT1-201ENST00000326656 NYXQ9GZU5 481 aa23.3■■□□□ 1.32
PTPMT1-201ENST00000326656 ERFEQ4G0M1 354 aa23.29■■□□□ 1.32
PTPMT1-201ENST00000326656 SMC1BQ8NDV3 1235 aa23.29■■□□□ 1.32
PTPMT1-201ENST00000326656 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
PTPMT1-201ENST00000326656 MAP3K15Q6ZN16 1313 aa23.29■■□□□ 1.32
PTPMT1-201ENST00000326656 MYBBP1AQ9BQG0 1328 aaKnown RBP23.29■■□□□ 1.32
PTPMT1-201ENST00000326656 TIAM2Q8IVF5 1701 aa23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 DDX10Q13206 875 aaKnown RBP23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 DNAJC5GQ8N7S2 189 aa23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 ZNF219Q9P2Y4 722 aaPredicted RBP23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
PTPMT1-201ENST00000326656 TMPOP42166 694 aaKnown RBP23.27■■□□□ 1.32
PTPMT1-201ENST00000326656 TSPYL4Q9UJ04 414 aa23.27■■□□□ 1.32
PTPMT1-201ENST00000326656 NUP98P52948 1817 aa23.26■■□□□ 1.31
PTPMT1-201ENST00000326656 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
PTPMT1-201ENST00000326656 CCDC93Q567U6 631 aa23.25■■□□□ 1.31
PTPMT1-201ENST00000326656 CACNA1SQ13698 1873 aa23.24■■□□□ 1.31
PTPMT1-201ENST00000326656 MYL6BP14649 208 aa23.24■■□□□ 1.31
PTPMT1-201ENST00000326656 IBTKQ9P2D0 1353 aaPredicted RBP23.24■■□□□ 1.31
PTPMT1-201ENST00000326656 WDR90Q96KV7 1748 aa23.23■■□□□ 1.31
PTPMT1-201ENST00000326656 HTRA3P83110 453 aa23.23■■□□□ 1.31
PTPMT1-201ENST00000326656 CRY2Q49AN0 593 aa23.23■■□□□ 1.31
PTPMT1-201ENST00000326656 TTLL7Q6ZT98 887 aa23.23■■□□□ 1.31
PTPMT1-201ENST00000326656 RTKN2Q8IZC4 609 aa23.23■■□□□ 1.31
PTPMT1-201ENST00000326656 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
PTPMT1-201ENST00000326656 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
PTPMT1-201ENST00000326656 RIC1Q4ADV7 1423 aa23.22■■□□□ 1.31
PTPMT1-201ENST00000326656 POTECB2RU33 542 aa23.21■■□□□ 1.31
PTPMT1-201ENST00000326656 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
PTPMT1-201ENST00000326656 HOXA10P31260 410 aaPredicted RBP23.2■■□□□ 1.3
PTPMT1-201ENST00000326656 FKBP4Q02790 459 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTPMT1-201ENST00000326656 CC2D2BQ6DHV5 1058 aa23.2■■□□□ 1.3
PTPMT1-201ENST00000326656 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
PTPMT1-201ENST00000326656 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
PTPMT1-201ENST00000326656 PDIA6Q15084 440 aa23.19■■□□□ 1.3
PTPMT1-201ENST00000326656 GRIPAP1Q4V328 841 aa23.19■■□□□ 1.3
PTPMT1-201ENST00000326656 PARP10Q53GL7 1025 aa23.19■■□□□ 1.3
PTPMT1-201ENST00000326656 LRP10Q7Z4F1 713 aa23.19■■□□□ 1.3
PTPMT1-201ENST00000326656 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
PTPMT1-201ENST00000326656 CHL1O00533 1208 aa23.18■■□□□ 1.3
PTPMT1-201ENST00000326656 PPP1R42Q7Z4L9 355 aa23.18■■□□□ 1.3
PTPMT1-201ENST00000326656 EIF2S2P20042 333 aaKnown RBP23.17■■□□□ 1.3
PTPMT1-201ENST00000326656 SUSD4Q5VX71 490 aa23.17■■□□□ 1.3
PTPMT1-201ENST00000326656 NUTM1Q86Y26 1132 aa23.17■■□□□ 1.3
PTPMT1-201ENST00000326656 UBN2Q6ZU65 1347 aa23.16■■□□□ 1.3
PTPMT1-201ENST00000326656 GPTP24298 496 aa23.16■■□□□ 1.3
PTPMT1-201ENST00000326656 KLRG1Q96E93 195 aa23.16■■□□□ 1.3
PTPMT1-201ENST00000326656 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 IQCA1LA6NCM1 817 aa23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 DDNO94850 711 aaPredicted RBP23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 RPGRQ92834 1020 aaKnown RBP23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 L3MBTL3Q96JM7 780 aaPredicted RBP23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 CRAMP1Q96RY5 1269 aa23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 PSMD1Q99460 953 aa23.15■■□□□ 1.3
PTPMT1-201ENST00000326656 RNF123Q5XPI4 1314 aa23.14■■□□□ 1.3
PTPMT1-201ENST00000326656 NTSR2O95665 410 aa23.14■■□□□ 1.29
PTPMT1-201ENST00000326656 HSP90AB3PQ58FF7 597 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms