RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 MPNDQ8N594 471 aa12.3□□□□□ -0.44
LCLAT1-202ENST00000319406 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
LCLAT1-202ENST00000319406 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
LCLAT1-202ENST00000319406 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 TEFQ10587 303 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 STRCP1A6NGW2 1772 aa12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
LCLAT1-202ENST00000319406 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 CHMLP26374 656 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 MTX1Q13505 466 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 GTPBP4Q9BZE4 634 aaKnown RBP12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 ANXA1P04083 346 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 KIAA2012Q0VF49 1180 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 ZNF830Q96NB3 372 aaPredicted RBP12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 C19orf44Q9H6X5 657 aa12.28□□□□□ -0.44
LCLAT1-202ENST00000319406 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.44
LCLAT1-202ENST00000319406 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.44
LCLAT1-202ENST00000319406 DCCP43146 1447 aa12.27□□□□□ -0.45
LCLAT1-202ENST00000319406 SCN11AQ9UI33 1791 aa12.27□□□□□ -0.45
LCLAT1-202ENST00000319406 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
LCLAT1-202ENST00000319406 PROSER3Q2NL68 480 aa12.27□□□□□ -0.45
LCLAT1-202ENST00000319406 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
LCLAT1-202ENST00000319406 KIF20AO95235 890 aa12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 DNTTIP2Q5QJE6 756 aaKnown RBP12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 RHPN1Q8TCX5 695 aa12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 IL25Q9H293 177 aa12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
LCLAT1-202ENST00000319406 C5P01031 1676 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 ST18O60284 1047 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 PDE4CQ08493 712 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 PDIA6Q15084 440 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 PALD1Q9ULE6 856 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 MRC1P22897 1456 aa12.25□□□□□ -0.45
LCLAT1-202ENST00000319406 IGSF3O75054 1194 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 SURF6O75683 361 aaKnown RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 ALDH1L1O75891 902 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 PTMAP06454 111 aaKnown RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 ANAPC15P60006 121 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 KIF1BPQ96EK5 621 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 PRIMPOLQ96LW4 560 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 MEGF6O75095 1541 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 UTYO14607 1347 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 HMGN5P82970 282 aaKnown RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 PIBF1Q8WXW3 757 aa12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 CWC22Q9HCG8 908 aaKnown RBP12.24□□□□□ -0.45
LCLAT1-202ENST00000319406 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 BCL2L12Q9HB09 334 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 MAP3K2Q9Y2U5 619 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 GLI3P10071 1580 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 TMEM51Q9NW97 253 aa12.23□□□□□ -0.45
LCLAT1-202ENST00000319406 RILPL2Q969X0 211 aa12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 TTC12Q9H892 705 aaPredicted RBP12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 CUL4AQ13619 759 aa12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 DDX21Q9NR30 783 aaKnown RBP eCLIP12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
LCLAT1-202ENST00000319406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
LCLAT1-202ENST00000319406 KIF3AQ9Y496 699 aa12.21□□□□□ -0.45
LCLAT1-202ENST00000319406 PHKG2P15735 406 aa12.21□□□□□ -0.46
LCLAT1-202ENST00000319406 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.46
LCLAT1-202ENST00000319406 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.46
LCLAT1-202ENST00000319406 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.46
LCLAT1-202ENST00000319406 TNS3Q68CZ2 1445 aa12.21□□□□□ -0.46
LCLAT1-202ENST00000319406 SGSM2O43147 1006 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 HSPA4P34932 840 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 LINS1Q8NG48 757 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 TSPY26PQ9H489 355 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 ANO2Q9NQ90 1003 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 TTC41PQ6P2S7 1318 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 MCM2P49736 904 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms