RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 CASTP20810 708 aaKnown RBP19.49■□□□□ 0.71
CACFD1-202ENST00000316948 PTGS1P23219 599 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 GJB2P29033 226 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
CACFD1-202ENST00000316948 RAD50Q92878 1312 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 SURF6O75683 361 aaKnown RBP19.49■□□□□ 0.71
CACFD1-202ENST00000316948 NLRP6P59044 892 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 CAMK4Q16566 473 aa19.49■□□□□ 0.71
CACFD1-202ENST00000316948 DDX54Q8TDD1 881 aaKnown RBP19.49■□□□□ 0.71
CACFD1-202ENST00000316948 GOLGA6L6A8MZA4 724 aa19.48■□□□□ 0.71
CACFD1-202ENST00000316948 SGSM2O43147 1006 aa19.48■□□□□ 0.71
CACFD1-202ENST00000316948 AMOTL2Q9Y2J4 779 aa19.48■□□□□ 0.71
CACFD1-202ENST00000316948 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
CACFD1-202ENST00000316948 CCDC192P0DO97 292 aa19.48■□□□□ 0.71
CACFD1-202ENST00000316948 BCL11BQ9C0K0 894 aaPredicted RBP19.47■□□□□ 0.71
CACFD1-202ENST00000316948 FAM208AQ9UK61 1670 aaKnown RBP19.47■□□□□ 0.71
CACFD1-202ENST00000316948 LSG1Q9H089 658 aaKnown RBP19.47■□□□□ 0.71
CACFD1-202ENST00000316948 MTMR6Q9Y217 621 aa19.46■□□□□ 0.71
CACFD1-202ENST00000316948 RGPD8O14715 1765 aaPredicted RBP19.46■□□□□ 0.71
CACFD1-202ENST00000316948 TPM3P06753 285 aa19.46■□□□□ 0.71
CACFD1-202ENST00000316948 PPP1R42Q7Z4L9 355 aa19.46■□□□□ 0.71
CACFD1-202ENST00000316948 DRC7Q8IY82 874 aa19.46■□□□□ 0.71
CACFD1-202ENST00000316948 USHBP1Q8N6Y0 703 aa19.46■□□□□ 0.71
CACFD1-202ENST00000316948 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
CACFD1-202ENST00000316948 HDGFL1Q5TGJ6 251 aa19.45■□□□□ 0.7
CACFD1-202ENST00000316948 LUZP1Q86V48 1076 aa19.45■□□□□ 0.7
CACFD1-202ENST00000316948 ANKRD7Q92527 254 aa19.45■□□□□ 0.7
CACFD1-202ENST00000316948 C16orf45Q96MC5 204 aaPredicted RBP19.45■□□□□ 0.7
CACFD1-202ENST00000316948 PLEKHG1Q9ULL1 1385 aa19.45■□□□□ 0.7
CACFD1-202ENST00000316948 HTATSF1O43719 755 aaKnown RBP19.44■□□□□ 0.7
CACFD1-202ENST00000316948 LRMPQ12912 555 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
CACFD1-202ENST00000316948 FERMT3Q86UX7 667 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 PI4K2BQ8TCG2 481 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 EIF2S2P20042 333 aaKnown RBP19.44■□□□□ 0.7
CACFD1-202ENST00000316948 HOXC9P31274 260 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 FAM173BQ6P4H8 233 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 CCDC186Q7Z3E2 898 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 CKAP2LQ8IYA6 745 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 SSH3Q8TE77 659 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
CACFD1-202ENST00000316948 JAKMIP1Q96N16 626 aaKnown RBP19.44■□□□□ 0.7
CACFD1-202ENST00000316948 CNTROBQ8N137 903 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 PDRG1Q9NUG6 133 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 MAP3K5Q99683 1374 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 AOX1Q06278 1338 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 ADCK5Q3MIX3 580 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 RHPN1Q8TCX5 695 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
CACFD1-202ENST00000316948 CTIFO43310 598 aaKnown RBP19.42■□□□□ 0.7
CACFD1-202ENST00000316948 PRPF40BQ6NWY9 871 aaKnown RBP19.42■□□□□ 0.7
CACFD1-202ENST00000316948 FAM200AQ8TCP9 573 aa19.42■□□□□ 0.7
CACFD1-202ENST00000316948 SRGAP3O43295 1099 aa19.42■□□□□ 0.7
CACFD1-202ENST00000316948 EPB41L2O43491 1005 aaKnown RBP19.42■□□□□ 0.7
CACFD1-202ENST00000316948 KIF20AO95235 890 aa19.42■□□□□ 0.7
CACFD1-202ENST00000316948 NBPF7P0C2Y1 421 aaPredicted RBP19.42■□□□□ 0.7
CACFD1-202ENST00000316948 LIG1P18858 919 aa19.42■□□□□ 0.7
CACFD1-202ENST00000316948 PIK3C2AO00443 1686 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 TYRO3Q06418 890 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 MAP3K11Q16584 847 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 NCBP1Q09161 790 aaKnown RBP19.41■□□□□ 0.7
CACFD1-202ENST00000316948 NAA30Q147X3 362 aaPredicted RBP19.41■□□□□ 0.7
CACFD1-202ENST00000316948 TTC6Q86TZ1 520 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 NUP62CLQ9H1M0 184 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
CACFD1-202ENST00000316948 PTH1RQ03431 593 aa19.4■□□□□ 0.7
CACFD1-202ENST00000316948 TRIM5Q9C035 493 aa19.39■□□□□ 0.7
CACFD1-202ENST00000316948 ANXA1P04083 346 aa19.39■□□□□ 0.69
CACFD1-202ENST00000316948 LARP1BQ659C4 914 aaKnown RBP19.39■□□□□ 0.69
CACFD1-202ENST00000316948 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
CACFD1-202ENST00000316948 EID1Q9Y6B2 187 aa19.39■□□□□ 0.69
CACFD1-202ENST00000316948 ME3Q16798 604 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 ANO6Q4KMQ2 910 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 RAB11FIP3O75154 756 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 TNNT1P13805 278 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 POLA2Q14181 598 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 ABTB2Q8N961 1025 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 TNMDQ9H2S6 317 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 CBX8Q9HC52 389 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 CYP46A1Q9Y6A2 500 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 KRT85P78386 507 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 ST3GAL1Q11201 340 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 ZNF771Q7L3S4 317 aaPredicted RBP19.38■□□□□ 0.69
CACFD1-202ENST00000316948 DACT1Q9NYF0 836 aa19.38■□□□□ 0.69
CACFD1-202ENST00000316948 TFIP11Q9UBB9 837 aaKnown RBP19.38■□□□□ 0.69
CACFD1-202ENST00000316948 GOLGA6L4A6NEF3 574 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 OS9Q13438 667 aaPredicted RBP19.37■□□□□ 0.69
CACFD1-202ENST00000316948 NWD1Q149M9 1564 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 CDC37L1Q7L3B6 337 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 KIF1BPQ96EK5 621 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 CHPF2Q9P2E5 772 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 DIP2AQ14689 1571 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 VPS53Q5VIR6 699 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 SETD1BQ9UPS6 1966 aaKnown RBP19.37■□□□□ 0.69
CACFD1-202ENST00000316948 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
CACFD1-202ENST00000316948 PI4KAP2A4QPH2 592 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms