RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.24
PRKDC-201ENST00000314191 TFIP11Q9UBB9 837 aaKnown RBP7.34□□□□□ -1.24
PRKDC-201ENST00000314191 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 TEX13AQ9BXU3 409 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-201ENST00000314191 CPA1P15085 419 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC173Q0VFZ6 552 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 BICC1Q9H694 974 aaKnown RBP7.33□□□□□ -1.24
PRKDC-201ENST00000314191 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 CTNNA3Q9UI47 895 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 PES1O00541 588 aaKnown RBP7.33□□□□□ -1.24
PRKDC-201ENST00000314191 AIDAQ96BJ3 306 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 NACAP1Q9BZK3 213 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 USP16Q9Y5T5 823 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 IL2RBP14784 551 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 IGHMBP2P38935 993 aaKnown RBP7.33□□□□□ -1.24
PRKDC-201ENST00000314191 PRAMEF22A3QJZ6 481 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 HAND2P61296 217 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 USP6P35125 1406 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 IMMTQ16891 758 aaKnown RBP7.33□□□□□ -1.24
PRKDC-201ENST00000314191 R3HCC1Q9Y3T6 440 aaKnown RBP7.33□□□□□ -1.24
PRKDC-201ENST00000314191 PLXNC1O60486 1568 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 EFCAB6Q5THR3 1501 aa7.33□□□□□ -1.24
PRKDC-201ENST00000314191 CCT2P78371 535 aaKnown RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 RAB11FIP4Q86YS3 637 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 SIRT2Q8IXJ6 389 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 BRF1Q92994 677 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 TPD52L1Q16890 204 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 KLHL40Q2TBA0 621 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 SPC24Q8NBT2 197 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 ARHGEF10O15013 1369 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 ADCY10Q96PN6 1610 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 PHKG2P15735 406 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 BRPF1P55201 1214 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 SART3Q15020 963 aaKnown RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 NGLY1Q96IV0 654 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 STX6O43752 255 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 HOXB7P09629 217 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 TDO2P48775 406 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 NEK1Q96PY6 1258 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 KINO60870 393 aaKnown RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 ANAPC15P60006 121 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 CAMK4Q16566 473 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 TRIM5Q9C035 493 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 CLASP1Q7Z460 1538 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 FAM89AQ96GI7 184 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 ME1P48163 572 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 HSP90AB3PQ58FF7 597 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 ZNF592Q92610 1267 aa7.32□□□□□ -1.24
PRKDC-201ENST00000314191 GIGYF1O75420 1035 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 ZNF396Q96N95 335 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-201ENST00000314191 LRRC2Q9BYS8 371 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 METTL22Q9BUU2 404 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-201ENST00000314191 PROSER3Q2NL68 480 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-201ENST00000314191 TNMDQ9H2S6 317 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 GNL3LQ9NVN8 582 aaKnown RBP7.31□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC39Q9UFE4 941 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 MINDY4BA8MYZ0 360 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 IL15P40933 162 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC82Q8N4S0 544 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 NUP62CLQ9H1M0 184 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 TTC41PQ6P2S7 1318 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC69A6NI79 296 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 BEND3Q5T5X7 828 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 TIMM10P62072 90 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 ZNF213O14771 459 aa7.31□□□□□ -1.24
PRKDC-201ENST00000314191 SAMD1Q6SPF0 538 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-201ENST00000314191 VPS53Q5VIR6 699 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 DNAJC10Q8IXB1 793 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 ATP7BP35670 1465 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 AK2P54819 239 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 BCL11BQ9C0K0 894 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 SNX14Q9Y5W7 946 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 TMEM94Q12767 1356 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 FAM227BQ96M60 508 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 SH2B1Q9NRF2 756 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 ADGBQ8N7X0 1667 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 SYNMO15061 1565 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 AEBP2Q6ZN18 517 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 EDC3Q96F86 508 aaKnown RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 PLBD2Q8NHP8 589 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 SLAIN2Q9P270 581 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 CCDC192P0DO97 292 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.245e-8■■■■□ 23.6
PRKDC-201ENST00000314191 ATP2B3Q16720 1220 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 IQSEC3Q9UPP2 1182 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 XBP1P17861 261 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 GCKRQ14397 625 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 DDB1Q16531 1140 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 ZNF594Q96JF6 807 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 DZIP3Q86Y13 1208 aaKnown RBP7.3□□□□□ -1.24
PRKDC-201ENST00000314191 CLTCL1P53675 1640 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 IQGAP3Q86VI3 1631 aa7.3□□□□□ -1.24
PRKDC-201ENST00000314191 ATP6V1AP38606 617 aa7.29□□□□□ -1.24
PRKDC-201ENST00000314191 PANK2Q9BZ23 570 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms