RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CASTP20810 708 aaKnown RBP16.57■□□□□ 0.24
MKS1-201ENST00000313863 OS9Q13438 667 aaPredicted RBP16.57■□□□□ 0.24
MKS1-201ENST00000313863 NOLC1Q14978 699 aaKnown RBP eCLIP16.57■□□□□ 0.24
MKS1-201ENST00000313863 AMOTL2Q9Y2J4 779 aa16.57■□□□□ 0.24
MKS1-201ENST00000313863 MED1Q15648 1581 aaPredicted RBP16.57■□□□□ 0.24
MKS1-201ENST00000313863 KIF13AQ9H1H9 1805 aa16.57■□□□□ 0.24
MKS1-201ENST00000313863 HIP1O00291 1037 aa16.57■□□□□ 0.24
MKS1-201ENST00000313863 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
MKS1-201ENST00000313863 CLASRPQ8N2M8 674 aaKnown RBP16.57■□□□□ 0.24
MKS1-201ENST00000313863 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
MKS1-201ENST00000313863 PDRG1Q9NUG6 133 aa16.57■□□□□ 0.24
MKS1-201ENST00000313863 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
MKS1-201ENST00000313863 GOLGA6L6A8MZA4 724 aa16.56■□□□□ 0.24
MKS1-201ENST00000313863 MTX1Q13505 466 aa16.56■□□□□ 0.24
MKS1-201ENST00000313863 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
MKS1-201ENST00000313863 KCNB2Q92953 911 aa16.56■□□□□ 0.24
MKS1-201ENST00000313863 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
MKS1-201ENST00000313863 CEMIPQ8WUJ3 1361 aa16.56■□□□□ 0.24
MKS1-201ENST00000313863 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
MKS1-201ENST00000313863 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
MKS1-201ENST00000313863 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
MKS1-201ENST00000313863 RASEFQ8IZ41 740 aa16.55■□□□□ 0.24
MKS1-201ENST00000313863 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
MKS1-201ENST00000313863 FIBPO43427 364 aa16.55■□□□□ 0.24
MKS1-201ENST00000313863 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
MKS1-201ENST00000313863 ECHDC1Q9NTX5 307 aa16.55■□□□□ 0.24
MKS1-201ENST00000313863 LTN1O94822 1766 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 PDCP20941 246 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 GJB2P29033 226 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.24
MKS1-201ENST00000313863 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 JAKMIP1Q96N16 626 aaKnown RBP16.54■□□□□ 0.24
MKS1-201ENST00000313863 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
MKS1-201ENST00000313863 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 PSMA5P28066 241 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
MKS1-201ENST00000313863 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 FUCA2Q9BTY2 467 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 ADGRL3Q9HAR2 1447 aa16.53■□□□□ 0.24
MKS1-201ENST00000313863 NBPF7P0C2Y1 421 aaPredicted RBP16.52■□□□□ 0.24
MKS1-201ENST00000313863 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
MKS1-201ENST00000313863 CCDC171Q6TFL3 1326 aa16.52■□□□□ 0.24
MKS1-201ENST00000313863 PI4KAP2A4QPH2 592 aa16.52■□□□□ 0.23
MKS1-201ENST00000313863 IFIT2P09913 472 aaKnown RBP16.52■□□□□ 0.23
MKS1-201ENST00000313863 EIF2S2P20042 333 aaKnown RBP16.52■□□□□ 0.23
MKS1-201ENST00000313863 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.23
MKS1-201ENST00000313863 ANKRD1Q15327 319 aa16.52■□□□□ 0.23
MKS1-201ENST00000313863 PI4KAP1Q8N8J0 262 aa16.52■□□□□ 0.23
MKS1-201ENST00000313863 KRT85P78386 507 aa16.51■□□□□ 0.23
MKS1-201ENST00000313863 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
MKS1-201ENST00000313863 ELP1O95163 1332 aa16.51■□□□□ 0.23
MKS1-201ENST00000313863 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
MKS1-201ENST00000313863 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
MKS1-201ENST00000313863 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
MKS1-201ENST00000313863 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
MKS1-201ENST00000313863 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
MKS1-201ENST00000313863 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
MKS1-201ENST00000313863 KCNJ4P48050 445 aa16.49■□□□□ 0.23
MKS1-201ENST00000313863 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
MKS1-201ENST00000313863 ABTB2Q8N961 1025 aa16.49■□□□□ 0.23
MKS1-201ENST00000313863 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
MKS1-201ENST00000313863 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
MKS1-201ENST00000313863 TTC12Q9H892 705 aaPredicted RBP16.49■□□□□ 0.23
MKS1-201ENST00000313863 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
MKS1-201ENST00000313863 TEFQ10587 303 aa16.49■□□□□ 0.23
MKS1-201ENST00000313863 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
MKS1-201ENST00000313863 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
MKS1-201ENST00000313863 ADCY9O60503 1353 aa16.48■□□□□ 0.23
MKS1-201ENST00000313863 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
MKS1-201ENST00000313863 LARGE1O95461 756 aa16.48■□□□□ 0.23
MKS1-201ENST00000313863 PTH1RQ03431 593 aa16.48■□□□□ 0.23
MKS1-201ENST00000313863 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
MKS1-201ENST00000313863 ALDH8A1Q9H2A2 487 aaPredicted RBP16.48■□□□□ 0.23
MKS1-201ENST00000313863 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
MKS1-201ENST00000313863 LARP1BQ659C4 914 aaKnown RBP16.47■□□□□ 0.23
MKS1-201ENST00000313863 FAM200AQ8TCP9 573 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 IP6K1Q92551 441 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 ZNF830Q96NB3 372 aaPredicted RBP16.47■□□□□ 0.23
MKS1-201ENST00000313863 SCAND2PQ9GZW5 306 aaPredicted RBP16.47■□□□□ 0.23
MKS1-201ENST00000313863 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 PRDM4Q9UKN5 801 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 PLCB2Q00722 1185 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
MKS1-201ENST00000313863 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
MKS1-201ENST00000313863 CPA1P15085 419 aa16.46■□□□□ 0.23
MKS1-201ENST00000313863 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
MKS1-201ENST00000313863 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
MKS1-201ENST00000313863 PHRF1Q9P1Y6 1649 aaKnown RBP16.46■□□□□ 0.23
MKS1-201ENST00000313863 BTBD11A6QL63 1104 aa16.46■□□□□ 0.22
MKS1-201ENST00000313863 ME3Q16798 604 aa16.46■□□□□ 0.22
MKS1-201ENST00000313863 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.22
MKS1-201ENST00000313863 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.22
MKS1-201ENST00000313863 KSR2Q6VAB6 950 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms