RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
LAMA3-202ENST00000313654 B4GALNT4Q76KP1 1039 aa14.67□□□□□ -0.06
LAMA3-202ENST00000313654 USP5P45974 858 aa14.67□□□□□ -0.06
LAMA3-202ENST00000313654 RSPH3Q86UC2 560 aa14.67□□□□□ -0.06
LAMA3-202ENST00000313654 CKAP2LQ8IYA6 745 aa14.67□□□□□ -0.06
LAMA3-202ENST00000313654 TRIM4Q9C037 500 aa14.67□□□□□ -0.06
LAMA3-202ENST00000313654 MTIF2P46199 727 aaKnown RBP14.66□□□□□ -0.06
LAMA3-202ENST00000313654 GSTA5Q7RTV2 222 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 CCDC77Q9BR77 488 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 CETN1Q12798 172 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 IFI16Q16666 785 aaKnown RBP14.66□□□□□ -0.06
LAMA3-202ENST00000313654 MAP2K2P36507 400 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 KIF6Q6ZMV9 814 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 GKAP1Q5VSY0 366 aaPredicted RBP14.66□□□□□ -0.06
LAMA3-202ENST00000313654 AP1ARQ63HQ0 302 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 BLOC1S2Q6QNY1 142 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 LRRC45Q96CN5 670 aa14.66□□□□□ -0.06
LAMA3-202ENST00000313654 FMN1Q68DA7 1419 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 GNAI1P63096 354 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 SF3B2Q13435 895 aaKnown RBP14.65□□□□□ -0.06
LAMA3-202ENST00000313654 CCDC38Q502W7 563 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 GOLGA1Q92805 767 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 SNX16P57768 344 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 PLVAPQ9BX97 442 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 EVC2Q86UK5 1308 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 PHLDB2Q86SQ0 1253 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 PFDN1O60925 122 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 KCNK9Q9NPC2 374 aa14.65□□□□□ -0.06
LAMA3-202ENST00000313654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.07
LAMA3-202ENST00000313654 HSPA1LP34931 641 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 SELENOOQ9BVL4 669 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 PSMD6Q15008 389 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 ANKRD30AQ9BXX3 1397 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 SMIM24O75264 130 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
LAMA3-202ENST00000313654 PHACTR2O75167 634 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 FCHSD2O94868 740 aa14.64□□□□□ -0.07
LAMA3-202ENST00000313654 ZSCAN31Q96LW9 406 aaPredicted RBP14.64□□□□□ -0.07
LAMA3-202ENST00000313654 ZNF354CQ86Y25 554 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 FMNL3Q8IVF7 1028 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 CNNM1Q9NRU3 951 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 MCUR1Q96AQ8 359 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 CAPZA3Q96KX2 299 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 RRBP1Q9P2E9 1410 aaKnown RBP14.63□□□□□ -0.07
LAMA3-202ENST00000313654 VIMP08670 466 aaKnown RBP14.63□□□□□ -0.07
LAMA3-202ENST00000313654 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 RNF8O76064 485 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 TXNDC9O14530 226 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 ANKRD24Q8TF21 1146 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 TBC1D5Q92609 795 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 GTF3C6Q969F1 213 aa14.63□□□□□ -0.07
LAMA3-202ENST00000313654 PHAXQ9H814 394 aaKnown RBP14.63□□□□□ -0.07
LAMA3-202ENST00000313654 CCDC62Q6P9F0 684 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 SIL1Q9H173 461 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 TACC3Q9Y6A5 838 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 TTC12Q9H892 705 aaPredicted RBP14.62□□□□□ -0.07
LAMA3-202ENST00000313654 CTAGE15A4D2H0 777 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 ATP2A1O14983 1001 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 CTAGE8P0CG41 777 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 CTAGE4Q8IX94 777 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 CTAGE5O15320 804 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 MYCBPQ99417 103 aaPredicted RBP14.62□□□□□ -0.07
LAMA3-202ENST00000313654 TRAK1Q9UPV9 953 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 HPDP32754 393 aaPredicted RBP14.62□□□□□ -0.07
LAMA3-202ENST00000313654 CCDC40Q4G0X9 1142 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 MTUS1Q9ULD2 1270 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 ARHGEF2Q92974 986 aaKnown RBP14.62□□□□□ -0.07
LAMA3-202ENST00000313654 VCX3AQ9NNX9 186 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 WDR78Q5VTH9 848 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 TRIM68Q6AZZ1 485 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 DBN1Q16643 649 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 TMEM87AQ8NBN3 555 aa14.62□□□□□ -0.07
LAMA3-202ENST00000313654 FYB2Q5VWT5 728 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 CWC27Q6UX04 472 aaKnown RBP14.61□□□□□ -0.07
LAMA3-202ENST00000313654 CCDC25Q86WR0 208 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 BIN1O00499 593 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 HMOX1P09601 288 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 INPP1P49441 399 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 GNAI2P04899 355 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 ERCC6LQ2NKX8 1250 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 CCDC144AA2RUR9 1427 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 GNAI3P08754 354 aa14.61□□□□□ -0.07
LAMA3-202ENST00000313654 ZNF131P52739 623 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 TCERG1LQ5VWI1 586 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 CALCOCO2Q13137 446 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 GEN1Q17RS7 908 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 LRRC23Q53EV4 343 aaPredicted RBP14.6□□□□□ -0.07
LAMA3-202ENST00000313654 SCAND2PQ9GZW5 306 aaPredicted RBP14.6□□□□□ -0.07
LAMA3-202ENST00000313654 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 CCT6BQ92526 530 aa14.6□□□□□ -0.07
LAMA3-202ENST00000313654 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
LAMA3-202ENST00000313654 PRKRIP1Q9H875 184 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms