RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 CACNA1SQ13698 1873 aa23.98■■□□□ 1.43
RPA2-201ENST00000313433 CLEC4GQ6UXB4 293 aa23.98■■□□□ 1.43
RPA2-201ENST00000313433 LAS1LQ9Y4W2 734 aaKnown RBP23.98■■□□□ 1.43
RPA2-201ENST00000313433 ANXA1P04083 346 aa23.97■■□□□ 1.43
RPA2-201ENST00000313433 MYL6BP14649 208 aa23.97■■□□□ 1.43
RPA2-201ENST00000313433 ERBB4Q15303 1308 aa23.97■■□□□ 1.43
RPA2-201ENST00000313433 NGEFQ8N5V2 710 aa23.97■■□□□ 1.43
RPA2-201ENST00000313433 ARFGEF2Q9Y6D5 1785 aa23.97■■□□□ 1.43
RPA2-201ENST00000313433 ANKRD36CQ5JPF3 1778 aa23.96■■□□□ 1.43
RPA2-201ENST00000313433 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
RPA2-201ENST00000313433 CFAP44Q96MT7 982 aa23.96■■□□□ 1.43
RPA2-201ENST00000313433 SETDB2Q96T68 719 aa23.96■■□□□ 1.43
RPA2-201ENST00000313433 MBIPQ9NS73 344 aa23.96■■□□□ 1.43
RPA2-201ENST00000313433 PIM2Q9P1W9 311 aa23.96■■□□□ 1.43
RPA2-201ENST00000313433 RGL2O15211 777 aa23.95■■□□□ 1.42
RPA2-201ENST00000313433 EIF2S2P20042 333 aaKnown RBP23.95■■□□□ 1.42
RPA2-201ENST00000313433 SBF1O95248 1867 aa23.95■■□□□ 1.42
RPA2-201ENST00000313433 ATP10DQ9P241 1426 aa23.94■■□□□ 1.42
RPA2-201ENST00000313433 MAP3K15Q6ZN16 1313 aa23.94■■□□□ 1.42
RPA2-201ENST00000313433 NECTIN2Q92692 538 aa23.93■■□□□ 1.42
RPA2-201ENST00000313433 C2CD5Q86YS7 1000 aa23.92■■□□□ 1.42
RPA2-201ENST00000313433 CNBD1Q8NA66 436 aa23.92■■□□□ 1.42
RPA2-201ENST00000313433 BRIP1Q9BX63 1249 aa23.92■■□□□ 1.42
RPA2-201ENST00000313433 NIP7Q9Y221 180 aaKnown RBP eCLIP23.92■■□□□ 1.42
RPA2-201ENST00000313433 ZNF652Q9Y2D9 606 aa23.92■■□□□ 1.42
RPA2-201ENST00000313433 ERVV-1B6SEH8 477 aa23.91■■□□□ 1.42
RPA2-201ENST00000313433 DALRD3Q5D0E6 543 aaKnown RBP23.91■■□□□ 1.42
RPA2-201ENST00000313433 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
RPA2-201ENST00000313433 ZBTB3Q9H5J0 574 aa23.91■■□□□ 1.42
RPA2-201ENST00000313433 SLX4Q8IY92 1834 aa23.91■■□□□ 1.42
RPA2-201ENST00000313433 UBN2Q6ZU65 1347 aa23.9■■□□□ 1.42
RPA2-201ENST00000313433 IFT57Q9NWB7 429 aa23.9■■□□□ 1.42
RPA2-201ENST00000313433 ABCC12Q96J65 1359 aa23.89■■□□□ 1.41
RPA2-201ENST00000313433 NBPF5PQ86XG9 351 aaPredicted RBP23.88■■□□□ 1.41
RPA2-201ENST00000313433 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
RPA2-201ENST00000313433 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
RPA2-201ENST00000313433 DUSP27Q5VZP5 1158 aa23.87■■□□□ 1.41
RPA2-201ENST00000313433 KIF6Q6ZMV9 814 aa23.87■■□□□ 1.41
RPA2-201ENST00000313433 ARHGAP27Q6ZUM4 889 aa23.87■■□□□ 1.41
RPA2-201ENST00000313433 CCDC88AQ3V6T2 1871 aa23.87■■□□□ 1.41
RPA2-201ENST00000313433 FAM177BA6PVY3 158 aa23.86■■□□□ 1.41
RPA2-201ENST00000313433 H0YIN7 160 aa23.86■■□□□ 1.41
RPA2-201ENST00000313433 HOXB7P09629 217 aa23.86■■□□□ 1.41
RPA2-201ENST00000313433 CCDC27Q2M243 656 aa23.86■■□□□ 1.41
RPA2-201ENST00000313433 WWC1Q8IX03 1113 aa23.86■■□□□ 1.41
RPA2-201ENST00000313433 ZNF34Q8IZ26 560 aa23.86■■□□□ 1.41
RPA2-201ENST00000313433 DDX21Q9NR30 783 aaKnown RBP eCLIP23.86■■□□□ 1.41
RPA2-201ENST00000313433 GPTP24298 496 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 PDE6BP35913 854 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 PRELPP51888 382 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 GNAI1P63096 354 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 ST5P78524 1137 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 DIEXFQ68CQ4 756 aaKnown RBP23.85■■□□□ 1.41
RPA2-201ENST00000313433 GIGYF2Q6Y7W6 1299 aaKnown RBP23.85■■□□□ 1.41
RPA2-201ENST00000313433 MIER1Q8N108 512 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 XAGE3Q8WTP9 111 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 LAMB2P55268 1798 aa23.85■■□□□ 1.41
RPA2-201ENST00000313433 IBTKQ9P2D0 1353 aaPredicted RBP23.84■■□□□ 1.41
RPA2-201ENST00000313433 KLRG2A4D1S0 409 aaPredicted RBP23.84■■□□□ 1.41
RPA2-201ENST00000313433 SRGNP10124 158 aa23.84■■□□□ 1.41
RPA2-201ENST00000313433 HDGFL1Q5TGJ6 251 aa23.84■■□□□ 1.41
RPA2-201ENST00000313433 COPS6Q7L5N1 327 aa23.84■■□□□ 1.41
RPA2-201ENST00000313433 TTLL6Q8N841 843 aa23.84■■□□□ 1.41
RPA2-201ENST00000313433 C8orf58Q8NAV2 365 aa23.84■■□□□ 1.41
RPA2-201ENST00000313433 SUSD4Q5VX71 490 aa23.83■■□□□ 1.41
RPA2-201ENST00000313433 TSR2Q969E8 191 aaKnown RBP23.83■■□□□ 1.41
RPA2-201ENST00000313433 SALL2Q9Y467 1007 aaPredicted RBP23.83■■□□□ 1.41
RPA2-201ENST00000313433 TIAM2Q8IVF5 1701 aa23.82■■□□□ 1.4
RPA2-201ENST00000313433 RASSF7Q02833 373 aa23.82■■□□□ 1.4
RPA2-201ENST00000313433 NUTM1Q86Y26 1132 aa23.82■■□□□ 1.4
RPA2-201ENST00000313433 CCER2I3L3R5 266 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 NTSR2O95665 410 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
RPA2-201ENST00000313433 AIMP1Q12904 312 aaKnown RBP23.81■■□□□ 1.4
RPA2-201ENST00000313433 ERFEQ4G0M1 354 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 TPTE2Q6XPS3 522 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 TSPYL6Q8N831 410 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 ZNF622Q969S3 477 aaKnown RBP eCLIP23.81■■□□□ 1.48e-9■■□□□ 13.5
RPA2-201ENST00000313433 PDZRN3Q9UPQ7 1066 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
RPA2-201ENST00000313433 ELL2O00472 640 aaPredicted RBP23.8■■□□□ 1.4
RPA2-201ENST00000313433 NCBP3Q53F19 620 aaKnown RBP23.8■■□□□ 1.4
RPA2-201ENST00000313433 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
RPA2-201ENST00000313433 NFKBIEO00221 500 aa23.79■■□□□ 1.4
RPA2-201ENST00000313433 NPHP1O15259 732 aa23.79■■□□□ 1.4
RPA2-201ENST00000313433 STYK1Q6J9G0 422 aa23.79■■□□□ 1.4
RPA2-201ENST00000313433 SPINK5Q9NQ38 1064 aaPredicted RBP23.79■■□□□ 1.4
RPA2-201ENST00000313433 DICER1Q9UPY3 1922 aaKnown RBP23.78■■□□□ 1.4
RPA2-201ENST00000313433 C9orf131Q5VYM1 1079 aa23.78■■□□□ 1.4
RPA2-201ENST00000313433 MASTLQ96GX5 879 aa23.78■■□□□ 1.4
RPA2-201ENST00000313433 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
RPA2-201ENST00000313433 C3orf67Q6ZVT6 689 aa23.77■■□□□ 1.4
RPA2-201ENST00000313433 DBF4Q9UBU7 674 aaPredicted RBP23.77■■□□□ 1.4
RPA2-201ENST00000313433 C21orf2O43822 256 aa23.76■■□□□ 1.39
RPA2-201ENST00000313433 ZNF526Q8TF50 670 aaPredicted RBP23.76■■□□□ 1.39
RPA2-201ENST00000313433 NYXQ9GZU5 481 aa23.76■■□□□ 1.39
RPA2-201ENST00000313433 ZNF219Q9P2Y4 722 aaPredicted RBP23.76■■□□□ 1.39
RPA2-201ENST00000313433 IL16Q14005 1332 aa23.76■■□□□ 1.39
RPA2-201ENST00000313433 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
RPA2-201ENST00000313433 CRY2Q49AN0 593 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms