RNA–Protein interactions for RNA: ENST00000313219.8

CHMP7-201, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-201ENST00000313219 PKP1Q13835 747 aa16.6■□□□□ 0.25
CHMP7-201ENST00000313219 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
CHMP7-201ENST00000313219 SASS6Q6UVJ0 657 aa16.59■□□□□ 0.25
CHMP7-201ENST00000313219 DYNC1I1O14576 645 aa16.59■□□□□ 0.25
CHMP7-201ENST00000313219 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
CHMP7-201ENST00000313219 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.25
CHMP7-201ENST00000313219 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
CHMP7-201ENST00000313219 NEK4P51957 841 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 RIC3Q7Z5B4 369 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 IL25Q9H293 177 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 CHMLP26374 656 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 SIL1Q9H173 461 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 ZKSCAN5Q9Y2L8 839 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.24
CHMP7-201ENST00000313219 HOXB7P09629 217 aa16.57■□□□□ 0.24
CHMP7-201ENST00000313219 GTF2E1P29083 439 aaPredicted RBP16.57■□□□□ 0.24
CHMP7-201ENST00000313219 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
CHMP7-201ENST00000313219 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
CHMP7-201ENST00000313219 PPP1R9BQ96SB3 815 aa16.57■□□□□ 0.24
CHMP7-201ENST00000313219 DDIT3P35638 169 aa16.57■□□□□ 0.24
CHMP7-201ENST00000313219 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
CHMP7-201ENST00000313219 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
CHMP7-201ENST00000313219 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
CHMP7-201ENST00000313219 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
CHMP7-201ENST00000313219 NPHP3Q7Z494 1330 aa16.56■□□□□ 0.24
CHMP7-201ENST00000313219 KIAA2012Q0VF49 1180 aa16.56■□□□□ 0.24
CHMP7-201ENST00000313219 UPF3BQ9BZI7 483 aaKnown RBP16.56■□□□□ 0.24
CHMP7-201ENST00000313219 PHKG2P15735 406 aa16.56■□□□□ 0.24
CHMP7-201ENST00000313219 DMTNQ08495 405 aa16.56■□□□□ 0.24
CHMP7-201ENST00000313219 KLHDC4Q8TBB5 520 aa16.56■□□□□ 0.24
CHMP7-201ENST00000313219 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
CHMP7-201ENST00000313219 ST18O60284 1047 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 TTC12Q9H892 705 aaPredicted RBP16.55■□□□□ 0.24
CHMP7-201ENST00000313219 ZSCAN20P17040 1043 aaPredicted RBP16.55■□□□□ 0.24
CHMP7-201ENST00000313219 POLA2Q14181 598 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
CHMP7-201ENST00000313219 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
CHMP7-201ENST00000313219 CYP27B1O15528 508 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 KLHL40Q2TBA0 621 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 MTERF4Q7Z6M4 381 aaKnown RBP16.54■□□□□ 0.24
CHMP7-201ENST00000313219 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 SUCLG2Q96I99 432 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 MST1RQ04912 1400 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 ATP2B3Q16720 1220 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 MYD88Q99836 296 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
CHMP7-201ENST00000313219 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.246e-7■■■■□ 26.4
CHMP7-201ENST00000313219 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHMP7-201ENST00000313219 SLIT3O75094 1523 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 RAB11FIP3O75154 756 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 CWC27Q6UX04 472 aaKnown RBP16.53■□□□□ 0.24
CHMP7-201ENST00000313219 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
CHMP7-201ENST00000313219 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
CHMP7-201ENST00000313219 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
CHMP7-201ENST00000313219 STRN4Q9NRL3 753 aa16.52■□□□□ 0.24
CHMP7-201ENST00000313219 CCDC39Q9UFE4 941 aa16.52■□□□□ 0.24
CHMP7-201ENST00000313219 STAP2Q9UGK3 403 aa16.52■□□□□ 0.24
CHMP7-201ENST00000313219 ATP5J2-PTCD1G3V325 749 aa16.52■□□□□ 0.24
CHMP7-201ENST00000313219 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.24
CHMP7-201ENST00000313219 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.24
CHMP7-201ENST00000313219 PDIA6Q15084 440 aa16.52■□□□□ 0.24
CHMP7-201ENST00000313219 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.24
CHMP7-201ENST00000313219 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
CHMP7-201ENST00000313219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
CHMP7-201ENST00000313219 GRM8O00222 908 aa16.52■□□□□ 0.23
CHMP7-201ENST00000313219 DTNBO60941 627 aa16.52■□□□□ 0.23
CHMP7-201ENST00000313219 CABP4P57796 275 aa16.52■□□□□ 0.23
CHMP7-201ENST00000313219 TOM1L2Q6ZVM7 507 aa16.52■□□□□ 0.23
CHMP7-201ENST00000313219 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.23
CHMP7-201ENST00000313219 MEGF6O75095 1541 aa16.52■□□□□ 0.23
CHMP7-201ENST00000313219 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 PI4K2BQ8TCG2 481 aa16.51■□□□□ 0.23
CHMP7-201ENST00000313219 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 ERICH4A6NGS2 130 aa16.51■□□□□ 0.23
CHMP7-201ENST00000313219 AACSQ86V21 672 aa16.51■□□□□ 0.23
CHMP7-201ENST00000313219 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 MCCP23508 829 aa16.51■□□□□ 0.23
CHMP7-201ENST00000313219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHMP7-201ENST00000313219 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
CHMP7-201ENST00000313219 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
CHMP7-201ENST00000313219 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
CHMP7-201ENST00000313219 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
CHMP7-201ENST00000313219 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
CHMP7-201ENST00000313219 AK9Q5TCS8 1911 aa16.49■□□□□ 0.23
CHMP7-201ENST00000313219 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms