RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CCDC102BQ68D86 513 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 KANK3Q6NY19 840 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC194A0A1B0GVG4 234 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 FSD2A1L4K1 749 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 TOM1L2Q6ZVM7 507 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 C9orf84Q5VXU9 1444 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 SKILP12757 684 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 CKAP4Q07065 602 aaKnown RBP15.76■□□□□ 0.11
CLCN6-201ENST00000312413 MCM10Q7L590 875 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 TRIM27P14373 513 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
CLCN6-201ENST00000312413 FAM114A1Q8IWE2 563 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 PPM1EQ8WY54 764 aa15.76■□□□□ 0.11
CLCN6-201ENST00000312413 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC8Q9H0W5 538 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-201ENST00000312413 TNIP1Q15025 636 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 EVI5LQ96CN4 794 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 ZNF830Q96NB3 372 aaPredicted RBP15.75■□□□□ 0.11
CLCN6-201ENST00000312413 PYM1Q9BRP8 204 aaKnown RBP15.75■□□□□ 0.11
CLCN6-201ENST00000312413 RSPH14Q9UHP6 348 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 RBM25P49756 843 aaKnown RBP15.75■□□□□ 0.11
CLCN6-201ENST00000312413 CTAGE15A4D2H0 777 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 CTAGE8P0CG41 777 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 NOP2P46087 812 aaKnown RBP15.75■□□□□ 0.11
CLCN6-201ENST00000312413 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
CLCN6-201ENST00000312413 CTAGE6Q86UF2 777 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 CTAGE4Q8IX94 777 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 BBXQ8WY36 941 aaPredicted RBP15.75■□□□□ 0.11
CLCN6-201ENST00000312413 MKNK2Q9HBH9 465 aa15.75■□□□□ 0.11
CLCN6-201ENST00000312413 RNF41Q9H4P4 317 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-201ENST00000312413 IFIT3O14879 490 aaKnown RBP15.74■□□□□ 0.11
CLCN6-201ENST00000312413 NLRP5P59047 1200 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC186Q7Z3E2 898 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 SPATA24Q86W54 205 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 ZSCAN16Q9H4T2 348 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-201ENST00000312413 DNAI1Q9UI46 699 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 AMPD3Q01432 767 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 FAM200AQ8TCP9 573 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 FBF1Q8TES7 1133 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 CTNNA2P26232 953 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 CETN1Q12798 172 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 MAP3K12Q12852 859 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC40Q4G0X9 1142 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 ZSCAN22P10073 491 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-201ENST00000312413 ECHDC1Q9NTX5 307 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
CLCN6-201ENST00000312413 N4BP3O15049 544 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 MCM6Q14566 821 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 SLC52A1Q9NWF4 448 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 TUBB4AP04350 444 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 UBASH3AP57075 661 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
CLCN6-201ENST00000312413 SRRTQ9BXP5 876 aaKnown RBP15.73■□□□□ 0.11
CLCN6-201ENST00000312413 GTPBP4Q9BZE4 634 aaKnown RBP15.73■□□□□ 0.11
CLCN6-201ENST00000312413 IARSP41252 1262 aaKnown RBP15.73■□□□□ 0.11
CLCN6-201ENST00000312413 ISM2Q6H9L7 571 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 F6X3S4 739 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 RANBP6O60518 1105 aaKnown RBP15.73■□□□□ 0.11
CLCN6-201ENST00000312413 FAM69CQ0P6D2 419 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 TCP11L1Q9NUJ3 509 aa15.73■□□□□ 0.11
CLCN6-201ENST00000312413 ORC3Q9UBD5 711 aaPredicted RBP15.73■□□□□ 0.11
CLCN6-201ENST00000312413 SLU7O95391 586 aaKnown RBP15.72■□□□□ 0.11
CLCN6-201ENST00000312413 PROSER2Q86WR7 435 aaPredicted RBP15.72■□□□□ 0.11
CLCN6-201ENST00000312413 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 AKR1B10O60218 316 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 ATP2C2O75185 946 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 PANK2Q9BZ23 570 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 POLR3DP05423 398 aaPredicted RBP15.72■□□□□ 0.11
CLCN6-201ENST00000312413 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 HOMER2Q9NSB8 354 aa15.72■□□□□ 0.11
CLCN6-201ENST00000312413 GOLIM4O00461 696 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 IFI16Q16666 785 aaKnown RBP15.71■□□□□ 0.11
CLCN6-201ENST00000312413 A0A087WZG4 1122 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 IDEP14735 1019 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 ANO6Q4KMQ2 910 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC97Q96F63 343 aaPredicted RBP15.71■□□□□ 0.11
CLCN6-201ENST00000312413 CALML4Q96GE6 196 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
CLCN6-201ENST00000312413 HMG20BQ9P0W2 317 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 PTPRCP08575 1304 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 MYO1BO43795 1136 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 TCERG1LQ5VWI1 586 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.117e-7■■■■■ 36.6
CLCN6-201ENST00000312413 C11orf95C9JLR9 678 aaPredicted RBP15.71■□□□□ 0.11
CLCN6-201ENST00000312413 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 NEK1Q96PY6 1258 aa15.71■□□□□ 0.11
CLCN6-201ENST00000312413 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■■□□ 18.1
CLCN6-201ENST00000312413 IGHDP01880 384 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms