RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
VANGL1-201ENST00000310260 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.11
VANGL1-201ENST00000310260 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.11
VANGL1-201ENST00000310260 HOXB7P09629 217 aa15.76■□□□□ 0.11
VANGL1-201ENST00000310260 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
VANGL1-201ENST00000310260 GZF1Q9H116 711 aaPredicted RBP15.76■□□□□ 0.11
VANGL1-201ENST00000310260 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
VANGL1-201ENST00000310260 STK32BQ9NY57 414 aa15.75■□□□□ 0.11
VANGL1-201ENST00000310260 DBF4Q9UBU7 674 aaPredicted RBP15.75■□□□□ 0.11
VANGL1-201ENST00000310260 RTCBQ9Y3I0 505 aaKnown RBP15.75■□□□□ 0.11
VANGL1-201ENST00000310260 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
VANGL1-201ENST00000310260 MRE11P49959 708 aa15.75■□□□□ 0.11
VANGL1-201ENST00000310260 CLUAP1Q96AJ1 413 aa15.75■□□□□ 0.11
VANGL1-201ENST00000310260 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
VANGL1-201ENST00000310260 PDIA6Q15084 440 aa15.74■□□□□ 0.11
VANGL1-201ENST00000310260 TBC1D2BQ9UPU7 963 aa15.74■□□□□ 0.11
VANGL1-201ENST00000310260 C5P01031 1676 aa15.74■□□□□ 0.11
VANGL1-201ENST00000310260 RARSP54136 660 aaKnown RBP15.74■□□□□ 0.11
VANGL1-201ENST00000310260 G2E3Q7L622 706 aa15.74■□□□□ 0.11
VANGL1-201ENST00000310260 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
VANGL1-201ENST00000310260 LY75O60449 1722 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
VANGL1-201ENST00000310260 ESPNB1AK53 854 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 SOCS7O14512 581 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 PDE3AQ14432 1141 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 RC3H1Q5TC82 1133 aaKnown RBP15.73■□□□□ 0.11
VANGL1-201ENST00000310260 COPS6Q7L5N1 327 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 XAGE3Q8WTP9 111 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 ZNF428Q96B54 188 aa15.73■□□□□ 0.11
VANGL1-201ENST00000310260 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
VANGL1-201ENST00000310260 PSDA5PKW4 1024 aaPredicted RBP15.72■□□□□ 0.11
VANGL1-201ENST00000310260 RPS6KA4O75676 772 aa15.72■□□□□ 0.11
VANGL1-201ENST00000310260 SLC15A2Q16348 729 aa15.72■□□□□ 0.11
VANGL1-201ENST00000310260 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
VANGL1-201ENST00000310260 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
VANGL1-201ENST00000310260 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
VANGL1-201ENST00000310260 CNTNAP4Q9C0A0 1308 aa15.72■□□□□ 0.11
VANGL1-201ENST00000310260 TRAK2O60296 914 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 R3HDM1Q15032 1099 aaKnown RBP15.71■□□□□ 0.11
VANGL1-201ENST00000310260 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 HYPKQ9NX55 129 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 SOS1Q07889 1333 aaPredicted RBP15.71■□□□□ 0.11
VANGL1-201ENST00000310260 CT47B1P0C2W7 299 aaPredicted RBP15.71■□□□□ 0.11
VANGL1-201ENST00000310260 RFC4P35249 363 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 ARHGEF1Q92888 912 aaKnown RBP15.71■□□□□ 0.11
VANGL1-201ENST00000310260 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 GRPEL1Q9HAV7 217 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 TJP1Q07157 1748 aa15.71■□□□□ 0.11
VANGL1-201ENST00000310260 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 PDGFDQ9GZP0 370 aaPredicted RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 MYH14Q7Z406 1995 aaKnown RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 IL6STP40189 918 aaPredicted RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 EIF5P55010 431 aaKnown RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 DZIP3Q86Y13 1208 aaKnown RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
VANGL1-201ENST00000310260 C4BP0C0L5 1744 aa15.69■□□□□ 0.1
VANGL1-201ENST00000310260 ZPR1O75312 459 aa15.69■□□□□ 0.1
VANGL1-201ENST00000310260 HMGB2P26583 209 aaKnown RBP15.69■□□□□ 0.1
VANGL1-201ENST00000310260 FLIIQ13045 1269 aa15.69■□□□□ 0.1
VANGL1-201ENST00000310260 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
VANGL1-201ENST00000310260 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
VANGL1-201ENST00000310260 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
VANGL1-201ENST00000310260 ALDH1L2Q3SY69 923 aa15.68■□□□□ 0.1
VANGL1-201ENST00000310260 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
VANGL1-201ENST00000310260 CHMP5Q9NZZ3 219 aa15.68■□□□□ 0.1
VANGL1-201ENST00000310260 ISY1Q9ULR0 285 aaKnown RBP15.68■□□□□ 0.1
VANGL1-201ENST00000310260 F6X3S4 739 aa15.68■□□□□ 0.1
VANGL1-201ENST00000310260 RIC3Q7Z5B4 369 aa15.68■□□□□ 0.1
VANGL1-201ENST00000310260 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
VANGL1-201ENST00000310260 COL15A1P39059 1388 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 TPM2P07951 284 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 SLC4A10Q6U841 1118 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 LRP10Q7Z4F1 713 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
VANGL1-201ENST00000310260 SSFA2P28290 1259 aa15.66■□□□□ 0.1
VANGL1-201ENST00000310260 AAMPQ13685 434 aa15.66■□□□□ 0.1
VANGL1-201ENST00000310260 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
VANGL1-201ENST00000310260 PNPLA7Q6ZV29 1317 aa15.66■□□□□ 0.1
VANGL1-201ENST00000310260 PI4KAP2A4QPH2 592 aa15.66■□□□□ 0.1
VANGL1-201ENST00000310260 PI4KAP1Q8N8J0 262 aa15.66■□□□□ 0.1
VANGL1-201ENST00000310260 A0A087WZG4 1122 aa15.65■□□□□ 0.1
VANGL1-201ENST00000310260 DDX11L8A8MPP1 907 aa15.65■□□□□ 0.1
VANGL1-201ENST00000310260 HLFQ16534 295 aa15.65■□□□□ 0.1
VANGL1-201ENST00000310260 DDX58O95786 925 aaKnown RBP15.65■□□□□ 0.1
VANGL1-201ENST00000310260 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
VANGL1-201ENST00000310260 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
VANGL1-201ENST00000310260 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
VANGL1-201ENST00000310260 FAM177BA6PVY3 158 aa15.64■□□□□ 0.09
VANGL1-201ENST00000310260 ATP5J2-PTCD1G3V325 749 aa15.64■□□□□ 0.09
VANGL1-201ENST00000310260 GPTP24298 496 aa15.64■□□□□ 0.09
VANGL1-201ENST00000310260 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.09
VANGL1-201ENST00000310260 RGPD3A6NKT7 1758 aaPredicted RBP15.64■□□□□ 0.09
VANGL1-201ENST00000310260 RGPD4Q7Z3J3 1758 aa15.64■□□□□ 0.09
VANGL1-201ENST00000310260 NUP188Q5SRE5 1749 aa15.63■□□□□ 0.09
VANGL1-201ENST00000310260 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms