RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SPATA31A6Q5VVP1 1343 aa17.55■□□□□ 0.4
PTPN9-201ENST00000306726 OFD1O75665 1012 aa17.54■□□□□ 0.4
PTPN9-201ENST00000306726 ADCY5O95622 1261 aa17.54■□□□□ 0.4
PTPN9-201ENST00000306726 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
PTPN9-201ENST00000306726 HSP90B1P14625 803 aaKnown RBP17.54■□□□□ 0.4
PTPN9-201ENST00000306726 CASTP20810 708 aaKnown RBP17.54■□□□□ 0.4
PTPN9-201ENST00000306726 ANKRD44Q8N8A2 993 aa17.54■□□□□ 0.4
PTPN9-201ENST00000306726 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
PTPN9-201ENST00000306726 PDCL3Q9H2J4 239 aa17.54■□□□□ 0.4
PTPN9-201ENST00000306726 A0A0G2JS52 829 aa17.53■□□□□ 0.4
PTPN9-201ENST00000306726 HOXC9P31274 260 aa17.53■□□□□ 0.4
PTPN9-201ENST00000306726 CHAF1AQ13111 956 aaPredicted RBP17.53■□□□□ 0.4
PTPN9-201ENST00000306726 LRSAM1Q6UWE0 723 aa17.53■□□□□ 0.4
PTPN9-201ENST00000306726 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
PTPN9-201ENST00000306726 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
PTPN9-201ENST00000306726 RPAP2Q8IXW5 612 aaPredicted RBP17.52■□□□□ 0.4
PTPN9-201ENST00000306726 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
PTPN9-201ENST00000306726 COL14A1Q05707 1796 aaKnown RBP17.52■□□□□ 0.39
PTPN9-201ENST00000306726 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.39
PTPN9-201ENST00000306726 DDX11Q96FC9 970 aa17.52■□□□□ 0.39
PTPN9-201ENST00000306726 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTPN9-201ENST00000306726 ZKSCAN5Q9Y2L8 839 aa17.51■□□□□ 0.39
PTPN9-201ENST00000306726 V9GYY5 206 aaPredicted RBP17.51■□□□□ 0.39
PTPN9-201ENST00000306726 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
PTPN9-201ENST00000306726 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
PTPN9-201ENST00000306726 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
PTPN9-201ENST00000306726 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
PTPN9-201ENST00000306726 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
PTPN9-201ENST00000306726 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
PTPN9-201ENST00000306726 BICD2Q8TD16 824 aa17.5■□□□□ 0.39
PTPN9-201ENST00000306726 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
PTPN9-201ENST00000306726 DNM1Q05193 864 aaKnown RBP17.5■□□□□ 0.39
PTPN9-201ENST00000306726 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
PTPN9-201ENST00000306726 A0A087WWV3 80 aa17.49■□□□□ 0.39
PTPN9-201ENST00000306726 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
PTPN9-201ENST00000306726 IL13P35225 146 aa17.49■□□□□ 0.39
PTPN9-201ENST00000306726 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
PTPN9-201ENST00000306726 C16orf45Q96MC5 204 aaPredicted RBP17.49■□□□□ 0.39
PTPN9-201ENST00000306726 ESYT1Q9BSJ8 1104 aa17.49■□□□□ 0.39
PTPN9-201ENST00000306726 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
PTPN9-201ENST00000306726 MBD3O95983 291 aa17.48■□□□□ 0.39
PTPN9-201ENST00000306726 SYTL4Q96C24 671 aaPredicted RBP17.48■□□□□ 0.39
PTPN9-201ENST00000306726 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
PTPN9-201ENST00000306726 CCDC8Q9H0W5 538 aaPredicted RBP17.48■□□□□ 0.39
PTPN9-201ENST00000306726 FLIIQ13045 1269 aa17.48■□□□□ 0.39
PTPN9-201ENST00000306726 TRIM5Q9C035 493 aa17.48■□□□□ 0.39
PTPN9-201ENST00000306726 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
PTPN9-201ENST00000306726 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
PTPN9-201ENST00000306726 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
PTPN9-201ENST00000306726 KIAA0232Q92628 1395 aa17.47■□□□□ 0.39
PTPN9-201ENST00000306726 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.39
PTPN9-201ENST00000306726 GUCY1B3Q02153 619 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 ERCC4Q92889 916 aaPredicted RBP17.46■□□□□ 0.39
PTPN9-201ENST00000306726 IL16Q14005 1332 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 COL18A1P39060 1754 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
PTPN9-201ENST00000306726 PHF14O94880 888 aa17.46■□□□□ 0.38
PTPN9-201ENST00000306726 IL25Q9H293 177 aa17.46■□□□□ 0.38
PTPN9-201ENST00000306726 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
PTPN9-201ENST00000306726 NOL7Q9UMY1 257 aaKnown RBP17.45■□□□□ 0.38
PTPN9-201ENST00000306726 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
PTPN9-201ENST00000306726 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
PTPN9-201ENST00000306726 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
PTPN9-201ENST00000306726 BOLA2Q9H3K6 86 aa17.45■□□□□ 0.38
PTPN9-201ENST00000306726 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
PTPN9-201ENST00000306726 RAB11FIP4Q86YS3 637 aa17.44■□□□□ 0.38
PTPN9-201ENST00000306726 CHMLP26374 656 aa17.44■□□□□ 0.38
PTPN9-201ENST00000306726 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
PTPN9-201ENST00000306726 LARP1BQ659C4 914 aaKnown RBP17.44■□□□□ 0.38
PTPN9-201ENST00000306726 NCAPD2Q15021 1401 aa17.44■□□□□ 0.38
PTPN9-201ENST00000306726 AK2P54819 239 aa17.44■□□□□ 0.38
PTPN9-201ENST00000306726 TRMT1Q9NXH9 659 aaKnown RBP17.44■□□□□ 0.38
PTPN9-201ENST00000306726 KDRP35968 1356 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 GJB2P29033 226 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 NOLC1Q14978 699 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPN9-201ENST00000306726 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
PTPN9-201ENST00000306726 PPP1R9BQ96SB3 815 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
PTPN9-201ENST00000306726 GORABQ5T7V8 394 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
PTPN9-201ENST00000306726 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 ERBB3P21860 1342 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 H3BQV1 296 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 MYL6BP14649 208 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 ZNF445P59923 1031 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 TEFQ10587 303 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 IFFO2Q5TF58 517 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 SASS6Q6UVJ0 657 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 LUZP1Q86V48 1076 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
PTPN9-201ENST00000306726 DNAJC2Q99543 621 aaKnown RBP17.42■□□□□ 0.38
PTPN9-201ENST00000306726 ABCC4O15439 1325 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 PI4KAP2A4QPH2 592 aa17.41■□□□□ 0.38
PTPN9-201ENST00000306726 DDIT3P35638 169 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms