RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RBM8AQ9Y5S9 174 aaKnown RBP15.61■□□□□ 0.09
DDX54-201ENST00000306014 ABCC4O15439 1325 aa15.61■□□□□ 0.09
DDX54-201ENST00000306014 CHL1O00533 1208 aa15.61■□□□□ 0.09
DDX54-201ENST00000306014 SYT1P21579 422 aa15.6■□□□□ 0.09
DDX54-201ENST00000306014 DACT1Q9NYF0 836 aa15.6■□□□□ 0.09
DDX54-201ENST00000306014 ZHX1Q9UKY1 873 aaPredicted RBP15.6■□□□□ 0.09
DDX54-201ENST00000306014 TBC1D2BQ9UPU7 963 aa15.6■□□□□ 0.09
DDX54-201ENST00000306014 ANO10Q9NW15 660 aa15.6■□□□□ 0.09
DDX54-201ENST00000306014 CEP126Q9P2H0 1117 aa15.6■□□□□ 0.09
DDX54-201ENST00000306014 PA2G4Q9UQ80 394 aaKnown RBP15.6■□□□□ 0.09
DDX54-201ENST00000306014 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
DDX54-201ENST00000306014 TRPM1Q7Z4N2 1603 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 BRPF1P55201 1214 aaPredicted RBP15.59■□□□□ 0.09
DDX54-201ENST00000306014 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
DDX54-201ENST00000306014 CCDC186Q7Z3E2 898 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 JARID2Q92833 1246 aaPredicted RBP15.59■□□□□ 0.09
DDX54-201ENST00000306014 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
DDX54-201ENST00000306014 CCP110O43303 1012 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 PHAXQ9H814 394 aaKnown RBP15.59■□□□□ 0.09
DDX54-201ENST00000306014 ADCY10Q96PN6 1610 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 CCDC66A2RUB6 948 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 EYA1Q99502 592 aa15.59■□□□□ 0.09
DDX54-201ENST00000306014 SFPQP23246 707 aaKnown RBP eCLIP15.58■□□□□ 0.09
DDX54-201ENST00000306014 ANO6Q4KMQ2 910 aa15.58■□□□□ 0.09
DDX54-201ENST00000306014 NOC3LQ8WTT2 800 aaKnown RBP15.58■□□□□ 0.09
DDX54-201ENST00000306014 CCDC57Q2TAC2 916 aa15.58■□□□□ 0.08
DDX54-201ENST00000306014 KCNH5Q8NCM2 988 aa15.58■□□□□ 0.08
DDX54-201ENST00000306014 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
DDX54-201ENST00000306014 FAM177BA6PVY3 158 aa15.58■□□□□ 0.08
DDX54-201ENST00000306014 LRRC2Q9BYS8 371 aa15.58■□□□□ 0.08
DDX54-201ENST00000306014 GADD45BO75293 160 aaPredicted RBP15.57■□□□□ 0.08
DDX54-201ENST00000306014 PIP4K2BP78356 416 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 NEK1Q96PY6 1258 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 PRDM11Q9NQV5 511 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 HYPKQ9NX55 129 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 CFAP100Q494V2 611 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 KIF18AQ8NI77 898 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 CNNM1Q9NRU3 951 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 CTNNA3Q9UI47 895 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 TBX22Q9Y458 520 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 CADPS2Q86UW7 1296 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 SART3Q15020 963 aaKnown RBP15.57■□□□□ 0.08
DDX54-201ENST00000306014 AMOTQ4VCS5 1084 aa15.57■□□□□ 0.08
DDX54-201ENST00000306014 MAP3K19Q56UN5 1328 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 BRF1Q92994 677 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 STRN4Q9NRL3 753 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 BIN1O00499 593 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 MARCH6O60337 910 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 HSP90B2PQ58FF3 399 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 TRPM2O94759 1503 aa15.56■□□□□ 0.08
DDX54-201ENST00000306014 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.56■□□□□ 0.087e-7■■□□□ 13.5
DDX54-201ENST00000306014 ARAP3Q8WWN8 1544 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 C17orf53Q8N3J3 647 aaPredicted RBP15.55■□□□□ 0.08
DDX54-201ENST00000306014 PPP1R9BQ96SB3 815 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 A0A087WZG4 1122 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 ERICH4A6NGS2 130 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 CCAR1Q8IX12 1150 aaKnown RBP15.55■□□□□ 0.08
DDX54-201ENST00000306014 UBXN4Q92575 508 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 C8orf76Q96K31 380 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 IFIT1P09914 478 aaKnown RBP15.55■□□□□ 0.08
DDX54-201ENST00000306014 IMMTQ16891 758 aaKnown RBP15.55■□□□□ 0.08
DDX54-201ENST00000306014 DNAJC25Q9H1X3 360 aa15.55■□□□□ 0.08
DDX54-201ENST00000306014 CTAGE5O15320 804 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 UBE3BQ7Z3V4 1068 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 ATP5J2-PTCD1G3V325 749 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 PTCD1O75127 700 aaKnown RBP15.54■□□□□ 0.08
DDX54-201ENST00000306014 XBP1P17861 261 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 TYRO3Q06418 890 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 CCDC70Q6NSX1 233 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 DDX46Q7L014 1031 aaKnown RBP15.54■□□□□ 0.08
DDX54-201ENST00000306014 SIRT2Q8IXJ6 389 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 GOLIM4O00461 696 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
DDX54-201ENST00000306014 GPT2Q8TD30 523 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 PALD1Q9ULE6 856 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 BRD1O95696 1058 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
DDX54-201ENST00000306014 KCNA6P17658 529 aa15.54■□□□□ 0.08
DDX54-201ENST00000306014 PTGS1P23219 599 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 DHX8Q14562 1220 aaKnown RBP15.53■□□□□ 0.08
DDX54-201ENST00000306014 STX1AQ16623 288 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 FAM173BQ6P4H8 233 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 FLT4P35916 1363 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 RTL1A6NKG5 1358 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 CBFA2T2O43439 604 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 CWF19L2Q2TBE0 894 aaKnown RBP15.53■□□□□ 0.08
DDX54-201ENST00000306014 HMG20BQ9P0W2 317 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 IDH1O75874 414 aaKnown RBP15.53■□□□□ 0.08
DDX54-201ENST00000306014 LUZP1Q86V48 1076 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 TRIM22Q8IYM9 498 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
DDX54-201ENST00000306014 NUTM2BA6NNL0 878 aaPredicted RBP15.52■□□□□ 0.08
DDX54-201ENST00000306014 NUTM2EB1AL46 878 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms