RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 FLIIQ13045 1269 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 USPL1Q5W0Q7 1092 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 TBC1D2BQ9UPU7 963 aa11.28□□□□□ -0.6
VPREB1-201ENST00000302273 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 LAMB4A4D0S4 1761 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 MS4A1P11836 297 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.61
VPREB1-201ENST00000302273 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 RIC3Q7Z5B4 369 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
VPREB1-201ENST00000302273 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 SETDB2Q96T68 719 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
VPREB1-201ENST00000302273 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
VPREB1-201ENST00000302273 LRP5O75197 1615 aa11.27□□□□□ -0.61
VPREB1-201ENST00000302273 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 AIMP1Q12904 312 aaKnown RBP11.26□□□□□ -0.61
VPREB1-201ENST00000302273 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
VPREB1-201ENST00000302273 TPTE2Q6XPS3 522 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 ARXQ96QS3 562 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 METTL22Q9BUU2 404 aaPredicted RBP11.26□□□□□ -0.61
VPREB1-201ENST00000302273 PDGFDQ9GZP0 370 aaPredicted RBP11.26□□□□□ -0.61
VPREB1-201ENST00000302273 PHAXQ9H814 394 aaKnown RBP11.26□□□□□ -0.61
VPREB1-201ENST00000302273 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 RCAN3Q9UKA8 241 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
VPREB1-201ENST00000302273 PI4KAP2A4QPH2 592 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
VPREB1-201ENST00000302273 FKBP8Q14318 412 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 PI4KAP1Q8N8J0 262 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 CCDC191Q8NCU4 936 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 LINS1Q8NG48 757 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 NYXQ9GZU5 481 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
VPREB1-201ENST00000302273 UBR3Q6ZT12 1888 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 ALDH1L1O75891 902 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 ANXA1P04083 346 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 NFIXQ14938 502 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.24□□□□□ -0.61
VPREB1-201ENST00000302273 DNAAF4Q8WXU2 420 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 SGIP1Q9BQI5 828 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 MAP3K2Q9Y2U5 619 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 MYH14Q7Z406 1995 aaKnown RBP11.24□□□□□ -0.61
VPREB1-201ENST00000302273 CARMIL3Q8ND23 1372 aa11.24□□□□□ -0.61
VPREB1-201ENST00000302273 MMP10P09238 476 aa11.23□□□□□ -0.61
VPREB1-201ENST00000302273 HLFQ16534 295 aa11.23□□□□□ -0.61
VPREB1-201ENST00000302273 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
VPREB1-201ENST00000302273 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
VPREB1-201ENST00000302273 SRP68Q9UHB9 627 aaKnown RBP11.23□□□□□ -0.61
VPREB1-201ENST00000302273 NIP7Q9Y221 180 aaKnown RBP eCLIP11.23□□□□□ -0.61
VPREB1-201ENST00000302273 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
VPREB1-201ENST00000302273 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 SERPINB2P05120 415 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 PTGER2P43116 358 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
VPREB1-201ENST00000302273 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 G2E3Q7L622 706 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
VPREB1-201ENST00000302273 NOB1Q9ULX3 412 aaKnown RBP11.22□□□□□ -0.61
VPREB1-201ENST00000302273 CD2APQ9Y5K6 639 aa11.22□□□□□ -0.61
VPREB1-201ENST00000302273 ADCY9O60503 1353 aa11.21□□□□□ -0.61
VPREB1-201ENST00000302273 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
VPREB1-201ENST00000302273 TGFB2P61812 414 aa11.21□□□□□ -0.61
VPREB1-201ENST00000302273 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
VPREB1-201ENST00000302273 BEND3Q5T5X7 828 aa11.21□□□□□ -0.61
VPREB1-201ENST00000302273 NLRP10Q86W26 655 aa11.21□□□□□ -0.61
VPREB1-201ENST00000302273 NBPF5PQ86XG9 351 aaPredicted RBP11.21□□□□□ -0.61
VPREB1-201ENST00000302273 ZBTB38Q8NAP3 1195 aaPredicted RBP11.21□□□□□ -0.61
VPREB1-201ENST00000302273 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
VPREB1-201ENST00000302273 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
VPREB1-201ENST00000302273 CACNA1FO60840 1977 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 KLRG2A4D1S0 409 aaPredicted RBP11.2□□□□□ -0.62
VPREB1-201ENST00000302273 BCAR3O75815 825 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 ST5P78524 1137 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 INTS3Q68E01 1043 aaKnown RBP11.2□□□□□ -0.62
VPREB1-201ENST00000302273 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 CNBD1Q8NA66 436 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 SRCIN1Q9C0H9 1055 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 CWC25Q9NXE8 425 aaPredicted RBP11.2□□□□□ -0.62
VPREB1-201ENST00000302273 ATF5Q9Y2D1 282 aaPredicted RBP11.2□□□□□ -0.62
VPREB1-201ENST00000302273 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 UTRNP46939 3433 aa11.2□□□□□ -0.62
VPREB1-201ENST00000302273 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
VPREB1-201ENST00000302273 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
VPREB1-201ENST00000302273 NEURL1BA8MQ27 555 aa11.19□□□□□ -0.62
VPREB1-201ENST00000302273 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
VPREB1-201ENST00000302273 GTF2E1P29083 439 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms