RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 A0A0G2JLW4 131 aa23.66■■□□□ 1.38
SPSB3-201ENST00000301717 YBX3P16989 372 aaKnown RBP eCLIP23.66■■□□□ 1.38
SPSB3-201ENST00000301717 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
SPSB3-201ENST00000301717 ERBB4Q15303 1308 aa23.65■■□□□ 1.38
SPSB3-201ENST00000301717 GPR162Q16538 588 aa23.65■■□□□ 1.38
SPSB3-201ENST00000301717 DPEP1P16444 411 aa23.63■■□□□ 1.37
SPSB3-201ENST00000301717 AIMP1Q12904 312 aaKnown RBP23.63■■□□□ 1.37
SPSB3-201ENST00000301717 NCBP3Q53F19 620 aaKnown RBP23.63■■□□□ 1.37
SPSB3-201ENST00000301717 MAP3K15Q6ZN16 1313 aa23.63■■□□□ 1.37
SPSB3-201ENST00000301717 KIAA1551Q9HCM1 1747 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 AFDNP55196 1824 aaKnown RBP23.62■■□□□ 1.37
SPSB3-201ENST00000301717 FAM177BA6PVY3 158 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 CHRNA5P30532 468 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 KIF6Q6ZMV9 814 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 SETDB2Q96T68 719 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 IL16Q14005 1332 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 FANCIQ9NVI1 1328 aa23.62■■□□□ 1.37
SPSB3-201ENST00000301717 DCAF8L1A6NGE4 600 aa23.61■■□□□ 1.37
SPSB3-201ENST00000301717 HOXB7P09629 217 aa23.61■■□□□ 1.37
SPSB3-201ENST00000301717 COPS6Q7L5N1 327 aa23.61■■□□□ 1.37
SPSB3-201ENST00000301717 DDX21Q9NR30 783 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPSB3-201ENST00000301717 NIP7Q9Y221 180 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPSB3-201ENST00000301717 ZNF652Q9Y2D9 606 aa23.61■■□□□ 1.37
SPSB3-201ENST00000301717 KIF13BQ9NQT8 1826 aa23.61■■□□□ 1.37
SPSB3-201ENST00000301717 N4BP2Q86UW6 1770 aaPredicted RBP23.61■■□□□ 1.37
SPSB3-201ENST00000301717 TCERG1O14776 1098 aaKnown RBP23.6■■□□□ 1.37
SPSB3-201ENST00000301717 PRR5LQ6MZQ0 368 aa23.6■■□□□ 1.37
SPSB3-201ENST00000301717 WDR63Q8IWG1 891 aa23.6■■□□□ 1.37
SPSB3-201ENST00000301717 NRXN2Q9P2S2 1712 aa23.6■■□□□ 1.37
SPSB3-201ENST00000301717 GPTP24298 496 aa23.59■■□□□ 1.37
SPSB3-201ENST00000301717 CLEC4GQ6UXB4 293 aa23.59■■□□□ 1.37
SPSB3-201ENST00000301717 KCNA3P22001 575 aa23.59■■□□□ 1.37
SPSB3-201ENST00000301717 TGFB2P61812 414 aa23.59■■□□□ 1.37
SPSB3-201ENST00000301717 ZNF521Q96K83 1311 aa23.57■■□□□ 1.36
SPSB3-201ENST00000301717 ERVV-1B6SEH8 477 aa23.57■■□□□ 1.36
SPSB3-201ENST00000301717 ZNF428Q96B54 188 aa23.57■■□□□ 1.36
SPSB3-201ENST00000301717 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
SPSB3-201ENST00000301717 NBPF5PQ86XG9 351 aaPredicted RBP23.56■■□□□ 1.36
SPSB3-201ENST00000301717 CNBD1Q8NA66 436 aa23.56■■□□□ 1.36
SPSB3-201ENST00000301717 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
SPSB3-201ENST00000301717 UBN2Q6ZU65 1347 aa23.56■■□□□ 1.36
SPSB3-201ENST00000301717 NPHP1O15259 732 aa23.55■■□□□ 1.36
SPSB3-201ENST00000301717 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
SPSB3-201ENST00000301717 TWISTNBQ3B726 338 aaPredicted RBP23.55■■□□□ 1.36
SPSB3-201ENST00000301717 GIGYF2Q6Y7W6 1299 aaKnown RBP23.54■■□□□ 1.36
SPSB3-201ENST00000301717 BCS1LQ9Y276 419 aa23.54■■□□□ 1.36
SPSB3-201ENST00000301717 ATP10DQ9P241 1426 aa23.53■■□□□ 1.36
SPSB3-201ENST00000301717 RGL2O15211 777 aa23.52■■□□□ 1.36
SPSB3-201ENST00000301717 NUTM1Q86Y26 1132 aa23.52■■□□□ 1.36
SPSB3-201ENST00000301717 C2CD5Q86YS7 1000 aa23.52■■□□□ 1.36
SPSB3-201ENST00000301717 NUP98P52948 1817 aa23.52■■□□□ 1.36
SPSB3-201ENST00000301717 SUSD4Q5VX71 490 aa23.51■■□□□ 1.35
SPSB3-201ENST00000301717 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
SPSB3-201ENST00000301717 HYPKQ9NX55 129 aa23.51■■□□□ 1.35
SPSB3-201ENST00000301717 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
SPSB3-201ENST00000301717 GOLGA2Q08379 1002 aa23.5■■□□□ 1.35
SPSB3-201ENST00000301717 CCDC30Q5VVM6 783 aa23.5■■□□□ 1.35
SPSB3-201ENST00000301717 BRIP1Q9BX63 1249 aa23.5■■□□□ 1.35
SPSB3-201ENST00000301717 ABCC12Q96J65 1359 aa23.5■■□□□ 1.35
SPSB3-201ENST00000301717 ST5P78524 1137 aa23.5■■□□□ 1.35
SPSB3-201ENST00000301717 PIM2Q9P1W9 311 aa23.5■■□□□ 1.35
SPSB3-201ENST00000301717 ERFEQ4G0M1 354 aa23.49■■□□□ 1.35
SPSB3-201ENST00000301717 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
SPSB3-201ENST00000301717 VAMP4O75379 141 aa23.48■■□□□ 1.35
SPSB3-201ENST00000301717 TPTE2Q6XPS3 522 aa23.48■■□□□ 1.35
SPSB3-201ENST00000301717 ANKRD13DQ6ZTN6 518 aa23.48■■□□□ 1.35
SPSB3-201ENST00000301717 G2E3Q7L622 706 aa23.48■■□□□ 1.35
SPSB3-201ENST00000301717 PLBD2Q8NHP8 589 aa23.48■■□□□ 1.35
SPSB3-201ENST00000301717 MYH16Q9H6N6 1097 aa23.48■■□□□ 1.35
SPSB3-201ENST00000301717 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-201ENST00000301717 H0YIN7 160 aa23.47■■□□□ 1.35
SPSB3-201ENST00000301717 GRIN3BO60391 1043 aa23.47■■□□□ 1.35
SPSB3-201ENST00000301717 NTSR2O95665 410 aa23.47■■□□□ 1.35
SPSB3-201ENST00000301717 BRCA1P38398 1863 aaKnown RBP23.46■■□□□ 1.35
SPSB3-201ENST00000301717 ATP5J2-PTCD1G3V325 749 aa23.46■■□□□ 1.35
SPSB3-201ENST00000301717 GTF2E1P29083 439 aaPredicted RBP23.46■■□□□ 1.35
SPSB3-201ENST00000301717 DALRD3Q5D0E6 543 aaKnown RBP23.46■■□□□ 1.35
SPSB3-201ENST00000301717 ZNF622Q969S3 477 aaKnown RBP eCLIP23.46■■□□□ 1.353e-9■□□□□ 9
SPSB3-201ENST00000301717 YY1P25490 414 aa23.45■■□□□ 1.34
SPSB3-201ENST00000301717 PDE6BP35913 854 aa23.45■■□□□ 1.34
SPSB3-201ENST00000301717 TCIRG1Q13488 830 aa23.45■■□□□ 1.34
SPSB3-201ENST00000301717 NLRP10Q86W26 655 aa23.45■■□□□ 1.34
SPSB3-201ENST00000301717 SYNE4Q8N205 404 aa23.45■■□□□ 1.34
SPSB3-201ENST00000301717 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
SPSB3-201ENST00000301717 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
SPSB3-201ENST00000301717 TNRC6CQ9HCJ0 1690 aaKnown RBP23.44■■□□□ 1.34
SPSB3-201ENST00000301717 C3orf67Q6ZVT6 689 aa23.43■■□□□ 1.34
SPSB3-201ENST00000301717 RIC3Q7Z5B4 369 aa23.43■■□□□ 1.34
SPSB3-201ENST00000301717 NYXQ9GZU5 481 aa23.43■■□□□ 1.34
SPSB3-201ENST00000301717 ZNF219Q9P2Y4 722 aaPredicted RBP23.43■■□□□ 1.34
SPSB3-201ENST00000301717 SLFN5Q08AF3 891 aa23.42■■□□□ 1.34
SPSB3-201ENST00000301717 PARP10Q53GL7 1025 aa23.42■■□□□ 1.34
SPSB3-201ENST00000301717 SRGNP10124 158 aa23.42■■□□□ 1.34
SPSB3-201ENST00000301717 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
SPSB3-201ENST00000301717 UTP14AQ9BVJ6 771 aaKnown RBP23.42■■□□□ 1.34
SPSB3-201ENST00000301717 E9PSI1 815 aa23.41■■□□□ 1.34
SPSB3-201ENST00000301717 ARHGAP27Q6ZUM4 889 aa23.41■■□□□ 1.34
SPSB3-201ENST00000301717 PPP1R42Q7Z4L9 355 aa23.41■■□□□ 1.34
SPSB3-201ENST00000301717 TTLL6Q8N841 843 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms