RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 RTCBQ9Y3I0 505 aaKnown RBP13.66□□□□□ -0.22
VWA3A-201ENST00000299840 CLGNO14967 610 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 UTP14CQ5TAP6 766 aaKnown RBP13.65□□□□□ -0.22
VWA3A-201ENST00000299840 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 CCDC87Q9NVE4 849 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
VWA3A-201ENST00000299840 IGSF3O75054 1194 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 STARD3NLO95772 234 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
VWA3A-201ENST00000299840 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
VWA3A-201ENST00000299840 CHL1O00533 1208 aa13.64□□□□□ -0.23
VWA3A-201ENST00000299840 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
VWA3A-201ENST00000299840 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
VWA3A-201ENST00000299840 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
VWA3A-201ENST00000299840 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
VWA3A-201ENST00000299840 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
VWA3A-201ENST00000299840 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
VWA3A-201ENST00000299840 PTGER2P43116 358 aa13.63□□□□□ -0.23
VWA3A-201ENST00000299840 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
VWA3A-201ENST00000299840 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
VWA3A-201ENST00000299840 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
VWA3A-201ENST00000299840 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
VWA3A-201ENST00000299840 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
VWA3A-201ENST00000299840 TSPYL4Q9UJ04 414 aa13.62□□□□□ -0.23
VWA3A-201ENST00000299840 PATL2C9JE40 543 aaKnown RBP13.62□□□□□ -0.23
VWA3A-201ENST00000299840 MMP14P50281 582 aa13.62□□□□□ -0.23
VWA3A-201ENST00000299840 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
VWA3A-201ENST00000299840 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
VWA3A-201ENST00000299840 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
VWA3A-201ENST00000299840 FAM9BQ8IZU0 186 aa13.61□□□□□ -0.23
VWA3A-201ENST00000299840 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
VWA3A-201ENST00000299840 PHF14O94880 888 aa13.61□□□□□ -0.23
VWA3A-201ENST00000299840 ANP32BQ92688 251 aaKnown RBP13.61□□□□□ -0.23
VWA3A-201ENST00000299840 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
VWA3A-201ENST00000299840 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
VWA3A-201ENST00000299840 ZBTB1Q9Y2K1 713 aa13.61□□□□□ -0.23
VWA3A-201ENST00000299840 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
VWA3A-201ENST00000299840 EIF5P55010 431 aaKnown RBP13.6□□□□□ -0.23
VWA3A-201ENST00000299840 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
VWA3A-201ENST00000299840 IL6STP40189 918 aaPredicted RBP13.6□□□□□ -0.23
VWA3A-201ENST00000299840 GNAI1P63096 354 aa13.6□□□□□ -0.23
VWA3A-201ENST00000299840 SMIM5Q71RC9 77 aa13.6□□□□□ -0.23
VWA3A-201ENST00000299840 IL16Q14005 1332 aa13.6□□□□□ -0.23
VWA3A-201ENST00000299840 A0A087WZG4 1122 aa13.59□□□□□ -0.23
VWA3A-201ENST00000299840 COL15A1P39059 1388 aa13.59□□□□□ -0.23
VWA3A-201ENST00000299840 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
VWA3A-201ENST00000299840 PRAMEF22A3QJZ6 481 aa13.59□□□□□ -0.23
VWA3A-201ENST00000299840 RFC4P35249 363 aa13.59□□□□□ -0.23
VWA3A-201ENST00000299840 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
VWA3A-201ENST00000299840 POLD1P28340 1107 aa13.58□□□□□ -0.23
VWA3A-201ENST00000299840 ZNF592Q92610 1267 aa13.58□□□□□ -0.23
VWA3A-201ENST00000299840 MAP7D2Q96T17 732 aa13.58□□□□□ -0.23
VWA3A-201ENST00000299840 ERBB4Q15303 1308 aa13.58□□□□□ -0.24
VWA3A-201ENST00000299840 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
VWA3A-201ENST00000299840 A1BGP04217 495 aa13.58□□□□□ -0.24
VWA3A-201ENST00000299840 DMTNQ08495 405 aa13.58□□□□□ -0.24
VWA3A-201ENST00000299840 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
VWA3A-201ENST00000299840 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
VWA3A-201ENST00000299840 KIF13BQ9NQT8 1826 aa13.57□□□□□ -0.24
VWA3A-201ENST00000299840 HOXB7P09629 217 aa13.57□□□□□ -0.24
VWA3A-201ENST00000299840 GYS1P13807 737 aa13.57□□□□□ -0.24
VWA3A-201ENST00000299840 FAM43BQ6ZT52 329 aaPredicted RBP13.57□□□□□ -0.24
VWA3A-201ENST00000299840 NLGN1Q8N2Q7 840 aa13.57□□□□□ -0.24
VWA3A-201ENST00000299840 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
VWA3A-201ENST00000299840 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
VWA3A-201ENST00000299840 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
VWA3A-201ENST00000299840 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
VWA3A-201ENST00000299840 RGL2O15211 777 aa13.56□□□□□ -0.24
VWA3A-201ENST00000299840 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
VWA3A-201ENST00000299840 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
VWA3A-201ENST00000299840 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
VWA3A-201ENST00000299840 APPP05067 770 aa13.55□□□□□ -0.24
VWA3A-201ENST00000299840 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
VWA3A-201ENST00000299840 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
VWA3A-201ENST00000299840 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
VWA3A-201ENST00000299840 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
VWA3A-201ENST00000299840 NUP98P52948 1817 aa13.55□□□□□ -0.24
VWA3A-201ENST00000299840 ZPR1O75312 459 aa13.54□□□□□ -0.24
VWA3A-201ENST00000299840 CLSTN1O94985 981 aa13.54□□□□□ -0.24
VWA3A-201ENST00000299840 MSL1Q68DK7 614 aa13.54□□□□□ -0.24
VWA3A-201ENST00000299840 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
VWA3A-201ENST00000299840 SRP68Q9UHB9 627 aaKnown RBP13.54□□□□□ -0.24
VWA3A-201ENST00000299840 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
VWA3A-201ENST00000299840 ZNF521Q96K83 1311 aa13.54□□□□□ -0.24
VWA3A-201ENST00000299840 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
VWA3A-201ENST00000299840 TM4SF1P30408 202 aa13.53□□□□□ -0.24
VWA3A-201ENST00000299840 DNTTIP2Q5QJE6 756 aaKnown RBP13.53□□□□□ -0.24
VWA3A-201ENST00000299840 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
VWA3A-201ENST00000299840 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.24
VWA3A-201ENST00000299840 PDIA6Q15084 440 aa13.52□□□□□ -0.24
VWA3A-201ENST00000299840 CAMTA2O94983 1202 aa13.52□□□□□ -0.25
VWA3A-201ENST00000299840 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.25
VWA3A-201ENST00000299840 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
VWA3A-201ENST00000299840 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
VWA3A-201ENST00000299840 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
VWA3A-201ENST00000299840 KIF20AO95235 890 aa13.51□□□□□ -0.25
VWA3A-201ENST00000299840 MMP10P09238 476 aa13.51□□□□□ -0.25
VWA3A-201ENST00000299840 PTMSP20962 102 aa13.51□□□□□ -0.25
VWA3A-201ENST00000299840 MCCP23508 829 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms