RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 PDE1AP54750 535 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 SBNO1A3KN83 1393 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 CADPS2Q86UW7 1296 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 NRBP1Q9UHY1 535 aa17.69■□□□□ 0.42
SPIDR-201ENST00000297423 XRN1Q8IZH2 1706 aaKnown RBP17.69■□□□□ 0.42
SPIDR-201ENST00000297423 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
SPIDR-201ENST00000297423 TNMDQ9H2S6 317 aa17.68■□□□□ 0.42
SPIDR-201ENST00000297423 STX6O43752 255 aa17.68■□□□□ 0.42
SPIDR-201ENST00000297423 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.422e-13■■■■□ 26.1
SPIDR-201ENST00000297423 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
SPIDR-201ENST00000297423 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
SPIDR-201ENST00000297423 UVSSAQ2YD98 709 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 TCEANC2Q96MN5 208 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 TMEM94Q12767 1356 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 PPFIA3O75145 1194 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 CLEC17AQ6ZS10 378 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 CCAR2Q8N163 923 aaKnown RBP17.67■□□□□ 0.42
SPIDR-201ENST00000297423 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
SPIDR-201ENST00000297423 ESYT1Q9BSJ8 1104 aa17.67■□□□□ 0.42
SPIDR-201ENST00000297423 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
SPIDR-201ENST00000297423 HAP1P54257 671 aaPredicted RBP17.66■□□□□ 0.42
SPIDR-201ENST00000297423 NUP62CLQ9H1M0 184 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 USP31Q70CQ4 1352 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 UBE2HP62256 183 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 ANKRD44Q8N8A2 993 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 IQSEC2Q5JU85 1478 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 OGFRQ9NZT2 677 aa17.66■□□□□ 0.42
SPIDR-201ENST00000297423 HOMER1Q86YM7 354 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 MSH6P52701 1360 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 HOXC9P31274 260 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 ZSCAN22P10073 491 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-201ENST00000297423 SYT1P21579 422 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
SPIDR-201ENST00000297423 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-201ENST00000297423 CLIP2Q9UDT6 1046 aa17.65■□□□□ 0.42
SPIDR-201ENST00000297423 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-201ENST00000297423 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.42
SPIDR-201ENST00000297423 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 SKIDA1Q1XH10 827 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 LARP1BQ659C4 914 aaKnown RBP17.64■□□□□ 0.41
SPIDR-201ENST00000297423 EYA1Q99502 592 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 AKAP12Q02952 1782 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 GJB2P29033 226 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 ANO6Q4KMQ2 910 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 KIAA1524Q8TCG1 905 aa17.64■□□□□ 0.41
SPIDR-201ENST00000297423 CCDC9Q9Y3X0 531 aaKnown RBP17.64■□□□□ 0.41
SPIDR-201ENST00000297423 JAKMIP1Q96N16 626 aaKnown RBP17.63■□□□□ 0.41
SPIDR-201ENST00000297423 TPM3P06753 285 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 CEP135Q66GS9 1140 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 TRIM34Q9BYJ4 488 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 SSH2Q76I76 1423 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 HSP90B1P14625 803 aaKnown RBP17.62■□□□□ 0.41
SPIDR-201ENST00000297423 PTPN14Q15678 1187 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 TIGD1Q96MW7 591 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 KRT222Q8N1A0 295 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 ST7Q9NRC1 585 aa17.62■□□□□ 0.41
SPIDR-201ENST00000297423 CHD2O14647 1828 aaKnown RBP17.62■□□□□ 0.41
SPIDR-201ENST00000297423 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
SPIDR-201ENST00000297423 DNAJC25Q9H1X3 360 aa17.61■□□□□ 0.41
SPIDR-201ENST00000297423 GCP02774 474 aa17.61■□□□□ 0.41
SPIDR-201ENST00000297423 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
SPIDR-201ENST00000297423 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
SPIDR-201ENST00000297423 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
SPIDR-201ENST00000297423 GNAI2P04899 355 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 AK2P54819 239 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 ZC3H6P61129 1189 aaKnown RBP17.6■□□□□ 0.41
SPIDR-201ENST00000297423 KCNF1Q9H3M0 494 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 ELF2Q15723 593 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 TMX1Q9H3N1 280 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 F13A1P00488 732 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 FEZ1Q99689 392 aa17.6■□□□□ 0.41
SPIDR-201ENST00000297423 A0A087WWV3 80 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 TAF3Q5VWG9 929 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
SPIDR-201ENST00000297423 IP6K1Q92551 441 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 TOPAZ1Q8N9V7 1692 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 H3BQV1 296 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 EIF2S2P20042 333 aaKnown RBP17.59■□□□□ 0.41
SPIDR-201ENST00000297423 ZNF165P49910 485 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 IFFO2Q5TF58 517 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 UNC5CLQ8IV45 518 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 KRT85P78386 507 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 TYRO3Q06418 890 aa17.59■□□□□ 0.41
SPIDR-201ENST00000297423 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms