RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ADCY9O60503 1353 aa19.28■□□□□ 0.68
CCDC140-201ENST00000295226 COL15A1P39059 1388 aa19.28■□□□□ 0.68
CCDC140-201ENST00000295226 FKBP8Q14318 412 aa19.27■□□□□ 0.68
CCDC140-201ENST00000295226 ERICH6BQ5W0A0 696 aa19.27■□□□□ 0.68
CCDC140-201ENST00000295226 SLC4A10Q6U841 1118 aa19.27■□□□□ 0.68
CCDC140-201ENST00000295226 RIC3Q7Z5B4 369 aa19.27■□□□□ 0.68
CCDC140-201ENST00000295226 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
CCDC140-201ENST00000295226 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
CCDC140-201ENST00000295226 MAP3K2Q9Y2U5 619 aa19.27■□□□□ 0.68
CCDC140-201ENST00000295226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.27■□□□□ 0.67
CCDC140-201ENST00000295226 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.67
CCDC140-201ENST00000295226 HLFQ16534 295 aa19.26■□□□□ 0.67
CCDC140-201ENST00000295226 TRAPPC3LQ5T215 181 aa19.26■□□□□ 0.67
CCDC140-201ENST00000295226 KSR2Q6VAB6 950 aa19.26■□□□□ 0.67
CCDC140-201ENST00000295226 API5Q9BZZ5 524 aaKnown RBP19.26■□□□□ 0.67
CCDC140-201ENST00000295226 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
CCDC140-201ENST00000295226 UBR3Q6ZT12 1888 aa19.26■□□□□ 0.67
CCDC140-201ENST00000295226 NUP188Q5SRE5 1749 aa19.25■□□□□ 0.67
CCDC140-201ENST00000295226 DDX58O95786 925 aaKnown RBP19.25■□□□□ 0.67
CCDC140-201ENST00000295226 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
CCDC140-201ENST00000295226 DZIP1LQ8IYY4 767 aaKnown RBP19.25■□□□□ 0.67
CCDC140-201ENST00000295226 PLBD2Q8NHP8 589 aa19.25■□□□□ 0.67
CCDC140-201ENST00000295226 DNAAF4Q8WXU2 420 aa19.24■□□□□ 0.67
CCDC140-201ENST00000295226 MAP3K15Q6ZN16 1313 aa19.24■□□□□ 0.67
CCDC140-201ENST00000295226 SLC15A2Q16348 729 aa19.24■□□□□ 0.67
CCDC140-201ENST00000295226 FTSJ3Q8IY81 847 aaKnown RBP19.24■□□□□ 0.67
CCDC140-201ENST00000295226 TMEM57Q8N5G2 664 aa19.24■□□□□ 0.67
CCDC140-201ENST00000295226 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
CCDC140-201ENST00000295226 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
CCDC140-201ENST00000295226 RFC4P35249 363 aa19.23■□□□□ 0.67
CCDC140-201ENST00000295226 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 A0A087WZG4 1122 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 ATP5J2-PTCD1G3V325 749 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 MSH5O43196 834 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 COL23A1Q86Y22 540 aaPredicted RBP19.22■□□□□ 0.67
CCDC140-201ENST00000295226 MYD88Q99836 296 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 COG6Q9Y2V7 657 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 ABCC4O15439 1325 aa19.22■□□□□ 0.67
CCDC140-201ENST00000295226 SSFA2P28290 1259 aa19.21■□□□□ 0.67
CCDC140-201ENST00000295226 PNPLA7Q6ZV29 1317 aa19.21■□□□□ 0.67
CCDC140-201ENST00000295226 ZPR1O75312 459 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 HMGB2P26583 209 aaKnown RBP19.2■□□□□ 0.66
CCDC140-201ENST00000295226 PDE3AQ14432 1141 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 METTL22Q9BUU2 404 aaPredicted RBP19.2■□□□□ 0.66
CCDC140-201ENST00000295226 BCL2L12Q9HB09 334 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 NARFQ9UHQ1 456 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 CWF19L2Q2TBE0 894 aaKnown RBP19.2■□□□□ 0.66
CCDC140-201ENST00000295226 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 CRBNQ96SW2 442 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 PDGFDQ9GZP0 370 aaPredicted RBP19.2■□□□□ 0.66
CCDC140-201ENST00000295226 ARFGEF2Q9Y6D5 1785 aa19.2■□□□□ 0.66
CCDC140-201ENST00000295226 ERVV-1B6SEH8 477 aa19.19■□□□□ 0.66
CCDC140-201ENST00000295226 IGKV5-2P06315 115 aa19.19■□□□□ 0.66
CCDC140-201ENST00000295226 ADRA2BP18089 450 aa19.19■□□□□ 0.66
CCDC140-201ENST00000295226 GPTP24298 496 aa19.19■□□□□ 0.66
CCDC140-201ENST00000295226 GIGYF2Q6Y7W6 1299 aaKnown RBP19.19■□□□□ 0.66
CCDC140-201ENST00000295226 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
CCDC140-201ENST00000295226 C4AP0C0L4 1744 aa19.19■□□□□ 0.66
CCDC140-201ENST00000295226 USP42Q9H9J4 1324 aaKnown RBP19.18■□□□□ 0.66
CCDC140-201ENST00000295226 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
CCDC140-201ENST00000295226 NUP98P52948 1817 aa19.18■□□□□ 0.66
CCDC140-201ENST00000295226 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
CCDC140-201ENST00000295226 MS4A1P11836 297 aa19.17■□□□□ 0.66
CCDC140-201ENST00000295226 INTS3Q68E01 1043 aaKnown RBP19.17■□□□□ 0.66
CCDC140-201ENST00000295226 JARID2Q92833 1246 aaPredicted RBP19.17■□□□□ 0.66
CCDC140-201ENST00000295226 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
CCDC140-201ENST00000295226 NEXNQ0ZGT2 675 aa19.16■□□□□ 0.66
CCDC140-201ENST00000295226 TBC1D9BQ66K14 1250 aa19.16■□□□□ 0.66
CCDC140-201ENST00000295226 EXOC6Q8TAG9 804 aa19.16■□□□□ 0.66
CCDC140-201ENST00000295226 NEURL1BA8MQ27 555 aa19.15■□□□□ 0.66
CCDC140-201ENST00000295226 GYS1P13807 737 aa19.15■□□□□ 0.66
CCDC140-201ENST00000295226 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
CCDC140-201ENST00000295226 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
CCDC140-201ENST00000295226 LINS1Q8NG48 757 aa19.15■□□□□ 0.66
CCDC140-201ENST00000295226 FAM177BA6PVY3 158 aa19.14■□□□□ 0.66
CCDC140-201ENST00000295226 R3HDM1Q15032 1099 aaKnown RBP19.14■□□□□ 0.66
CCDC140-201ENST00000295226 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.66
CCDC140-201ENST00000295226 BCORQ6W2J9 1755 aa19.14■□□□□ 0.65
CCDC140-201ENST00000295226 UBN2Q6ZU65 1347 aa19.14■□□□□ 0.65
CCDC140-201ENST00000295226 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
CCDC140-201ENST00000295226 MSL1Q68DK7 614 aa19.14■□□□□ 0.65
CCDC140-201ENST00000295226 ZNF34Q8IZ26 560 aa19.14■□□□□ 0.65
CCDC140-201ENST00000295226 FLAD1Q8NFF5 587 aa19.14■□□□□ 0.65
CCDC140-201ENST00000295226 NIP7Q9Y221 180 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCDC140-201ENST00000295226 PSDA5PKW4 1024 aaPredicted RBP19.13■□□□□ 0.65
CCDC140-201ENST00000295226 CLEC4GQ6UXB4 293 aa19.13■□□□□ 0.65
CCDC140-201ENST00000295226 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
CCDC140-201ENST00000295226 ATP10DQ9P241 1426 aa19.12■□□□□ 0.65
CCDC140-201ENST00000295226 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
CCDC140-201ENST00000295226 NLRP10Q86W26 655 aa19.12■□□□□ 0.65
CCDC140-201ENST00000295226 MEIS3Q99687 375 aa19.12■□□□□ 0.65
CCDC140-201ENST00000295226 SCN7AQ01118 1682 aa19.12■□□□□ 0.65
CCDC140-201ENST00000295226 AFDNP55196 1824 aaKnown RBP19.12■□□□□ 0.65
CCDC140-201ENST00000295226 PXDNLA1KZ92 1463 aa19.11■□□□□ 0.65
CCDC140-201ENST00000295226 ZBTB7BO15156 539 aaPredicted RBP19.11■□□□□ 0.65
CCDC140-201ENST00000295226 ALDH1L1O75891 902 aa19.11■□□□□ 0.65
CCDC140-201ENST00000295226 GCKRQ14397 625 aa19.11■□□□□ 0.65
CCDC140-201ENST00000295226 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
CCDC140-201ENST00000295226 USP44Q9H0E7 712 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms