RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 FERMT3Q86UX7 667 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 DYNC1I1O14576 645 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 PPFIA3O75145 1194 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 PICALMQ13492 652 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 DACT3Q96B18 629 aaPredicted RBP14.29□□□□□ -0.12
SLX4-201ENST00000294008 NACA2Q9H009 215 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
SLX4-201ENST00000294008 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 IL27Q8NEV9 243 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 IQCA1Q86XH1 822 aa14.29□□□□□ -0.12
SLX4-201ENST00000294008 TBCAO75347 108 aaKnown RBP14.28□□□□□ -0.12
SLX4-201ENST00000294008 SLF2Q8IX21 1173 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 TXNDC16Q9P2K2 825 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 FAM169AQ9Y6X4 670 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 SMIM23A6NLE4 172 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 CACYBPQ9HB71 228 aaKnown RBP14.28□□□□□ -0.12
SLX4-201ENST00000294008 TRMT112Q9UI30 125 aaKnown RBP14.28□□□□□ -0.12
SLX4-201ENST00000294008 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
SLX4-201ENST00000294008 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 SPECC1LQ69YQ0 1117 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
SLX4-201ENST00000294008 KRT13P13646 458 aa14.27□□□□□ -0.12
SLX4-201ENST00000294008 CTR9Q6PD62 1173 aa14.27□□□□□ -0.12
SLX4-201ENST00000294008 MYD88Q99836 296 aa14.27□□□□□ -0.12
SLX4-201ENST00000294008 PRDM10Q9NQV6 1147 aa14.27□□□□□ -0.12
SLX4-201ENST00000294008 NOC2LQ9Y3T9 749 aaKnown RBP14.27□□□□□ -0.12
SLX4-201ENST00000294008 RFC4P35249 363 aa14.27□□□□□ -0.12
SLX4-201ENST00000294008 JADE2Q9NQC1 790 aa14.27□□□□□ -0.12
SLX4-201ENST00000294008 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.12
SLX4-201ENST00000294008 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.13
SLX4-201ENST00000294008 AFG3L2Q9Y4W6 797 aa14.27□□□□□ -0.13
SLX4-201ENST00000294008 CEP83Q9Y592 693 aa14.27□□□□□ -0.13
SLX4-201ENST00000294008 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
SLX4-201ENST00000294008 MTERF4Q7Z6M4 381 aaKnown RBP14.27□□□□□ -0.13
SLX4-201ENST00000294008 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.13
SLX4-201ENST00000294008 SEPT14Q6ZU15 432 aa14.27□□□□□ -0.13
SLX4-201ENST00000294008 CFAP157Q5JU67 520 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 EXOSC9Q06265 439 aaKnown RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 SLC5A1P13866 664 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 CALM1P0DP23 149 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 CALM2P0DP24 149 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 CALM3P0DP25 149 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 MCM2P49736 904 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 KANK4Q5T7N3 995 aaPredicted RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 GINS2Q9Y248 185 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 RAB3GAP2Q9H2M9 1393 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 A0A087WZG4 1122 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 PSMD6Q15008 389 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 DIXDC1Q155Q3 683 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 CATIPQ7Z7H3 387 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 TSPY2A6NKD2 308 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
SLX4-201ENST00000294008 XRCC6P12956 609 aaKnown RBP eCLIP14.26□□□□□ -0.13
SLX4-201ENST00000294008 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
SLX4-201ENST00000294008 YEATS4O95619 227 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 CGNQ9P2M7 1197 aaKnown RBP14.25□□□□□ -0.13
SLX4-201ENST00000294008 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.13
SLX4-201ENST00000294008 V9GYY5 206 aaPredicted RBP14.25□□□□□ -0.13
SLX4-201ENST00000294008 MICALCLQ6ZW33 695 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 CCDC83Q8IWF9 413 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 BOLA2Q9H3K6 86 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 CCDC14Q49A88 953 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 ZSWIM4Q9H7M6 989 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 CWC25Q9NXE8 425 aaPredicted RBP14.25□□□□□ -0.13
SLX4-201ENST00000294008 CCT2P78371 535 aaKnown RBP14.25□□□□□ -0.13
SLX4-201ENST00000294008 KAT14Q9H8E8 782 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 MAP3K12Q12852 859 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 BIN1O00499 593 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 ARID5AQ03989 594 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 GBP3Q9H0R5 595 aa14.25□□□□□ -0.13
SLX4-201ENST00000294008 GAS8O95995 478 aa14.24□□□□□ -0.13
SLX4-201ENST00000294008 CEP112Q8N8E3 955 aa14.24□□□□□ -0.13
SLX4-201ENST00000294008 CNNM3Q8NE01 707 aa14.24□□□□□ -0.13
SLX4-201ENST00000294008 SMC6Q96SB8 1091 aa14.24□□□□□ -0.13
SLX4-201ENST00000294008 ST5P78524 1137 aa14.24□□□□□ -0.13
SLX4-201ENST00000294008 UAP1Q16222 522 aaPredicted RBP14.24□□□□□ -0.13
SLX4-201ENST00000294008 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
SLX4-201ENST00000294008 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.24□□□□□ -0.13
SLX4-201ENST00000294008 NAA15Q9BXJ9 866 aaKnown RBP14.24□□□□□ -0.13
SLX4-201ENST00000294008 LARP6Q9BRS8 491 aaKnown RBP14.24□□□□□ -0.13
SLX4-201ENST00000294008 IMPG2Q9BZV3 1241 aa14.24□□□□□ -0.13
SLX4-201ENST00000294008 FAM13AO94988 1023 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 GSDMBQ8TAX9 411 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 TCP11L1Q9NUJ3 509 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 CCDC155Q8N6L0 562 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 IRAK4Q9NWZ3 460 aa14.23□□□□□ -0.13
SLX4-201ENST00000294008 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
SLX4-201ENST00000294008 ANO3Q9BYT9 981 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms