RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ANKIB1Q9P2G1 1089 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 VGLL3A8MV65 326 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 STAMBPO95630 424 aa18.61■□□□□ 0.57
SSRP1-202ENST00000293880 USO1O60763 962 aaKnown RBP18.6■□□□□ 0.57
SSRP1-202ENST00000293880 RPAP2Q8IXW5 612 aaPredicted RBP18.6■□□□□ 0.57
SSRP1-202ENST00000293880 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSRP1-202ENST00000293880 V9GYY5 206 aaPredicted RBP18.6■□□□□ 0.57
SSRP1-202ENST00000293880 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
SSRP1-202ENST00000293880 MCM3P25205 808 aa18.6■□□□□ 0.57
SSRP1-202ENST00000293880 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
SSRP1-202ENST00000293880 RSPH14Q9UHP6 348 aa18.6■□□□□ 0.57
SSRP1-202ENST00000293880 PUF60Q9UHX1 559 aaKnown RBP18.6■□□□□ 0.57
SSRP1-202ENST00000293880 ZNF213O14771 459 aa18.6■□□□□ 0.57
SSRP1-202ENST00000293880 KIF2AO00139 706 aaPredicted RBP18.59■□□□□ 0.57
SSRP1-202ENST00000293880 TCERG1LQ5VWI1 586 aa18.59■□□□□ 0.57
SSRP1-202ENST00000293880 CCDC175P0C221 793 aa18.59■□□□□ 0.57
SSRP1-202ENST00000293880 PAFAH1B1P43034 410 aa18.59■□□□□ 0.57
SSRP1-202ENST00000293880 ALS2CR12Q96Q35 445 aa18.59■□□□□ 0.57
SSRP1-202ENST00000293880 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.57
SSRP1-202ENST00000293880 CETN2P41208 172 aa18.58■□□□□ 0.57
SSRP1-202ENST00000293880 DZIP1Q86YF9 867 aaKnown RBP18.58■□□□□ 0.57
SSRP1-202ENST00000293880 CASKIN1Q8WXD9 1431 aa18.58■□□□□ 0.56
SSRP1-202ENST00000293880 TNIP1Q15025 636 aa18.58■□□□□ 0.56
SSRP1-202ENST00000293880 TBC1D9Q6ZT07 1266 aa18.58■□□□□ 0.56
SSRP1-202ENST00000293880 CCDC40Q4G0X9 1142 aa18.58■□□□□ 0.56
SSRP1-202ENST00000293880 FERMT2Q96AC1 680 aa18.58■□□□□ 0.56
SSRP1-202ENST00000293880 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.56
SSRP1-202ENST00000293880 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
SSRP1-202ENST00000293880 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
SSRP1-202ENST00000293880 RGS22Q8NE09 1264 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
SSRP1-202ENST00000293880 LIMCH1Q9UPQ0 1083 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 COMMD10Q9Y6G5 202 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 PRC1O43663 620 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 VPS36Q86VN1 386 aa18.57■□□□□ 0.56
SSRP1-202ENST00000293880 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
SSRP1-202ENST00000293880 GNG11P61952 73 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 HOOK3Q86VS8 718 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 STX6O43752 255 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 HSF2BPO75031 334 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 CEP57Q86XR8 500 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 NKTRP30414 1462 aaKnown RBP18.56■□□□□ 0.56
SSRP1-202ENST00000293880 CAVIN4Q5BKX8 364 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 GOLIM4O00461 696 aa18.56■□□□□ 0.56
SSRP1-202ENST00000293880 SPATA24Q86W54 205 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 MICALL1Q8N3F8 863 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 TMEM110-MUSTN1A8MSY1 372 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 AFMP43652 599 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 TMEM266Q2M3C6 531 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 PPP4R3AQ6IN85 833 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 IGHDP01880 384 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
SSRP1-202ENST00000293880 APBB1IPQ7Z5R6 666 aaPredicted RBP18.55■□□□□ 0.56
SSRP1-202ENST00000293880 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 SLC26A6Q9BXS9 759 aa18.55■□□□□ 0.56
SSRP1-202ENST00000293880 BAG4O95429 457 aaKnown RBP18.54■□□□□ 0.56
SSRP1-202ENST00000293880 ZNF444Q8N0Y2 327 aaPredicted RBP18.54■□□□□ 0.56
SSRP1-202ENST00000293880 CTCFLQ8NI51 663 aaPredicted RBP18.54■□□□□ 0.56
SSRP1-202ENST00000293880 SH2B1Q9NRF2 756 aaPredicted RBP18.54■□□□□ 0.56
SSRP1-202ENST00000293880 SNRKQ9NRH2 765 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 ANO6Q4KMQ2 910 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 AKAP2Q9Y2D5 859 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 CCDC194A0A1B0GVG4 234 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 TMCO4Q5TGY1 634 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 CCDC150Q8NCX0 1101 aa18.54■□□□□ 0.56
SSRP1-202ENST00000293880 FCHSD2O94868 740 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 ARID4AP29374 1257 aaPredicted RBP18.53■□□□□ 0.56
SSRP1-202ENST00000293880 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 WDR78Q5VTH9 848 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 MICU3Q86XE3 530 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 IDEP14735 1019 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 GIGYF2Q6Y7W6 1299 aaKnown RBP18.53■□□□□ 0.56
SSRP1-202ENST00000293880 GPTP24298 496 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 CUL5Q93034 780 aa18.53■□□□□ 0.56
SSRP1-202ENST00000293880 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
SSRP1-202ENST00000293880 TMEM67Q5HYA8 995 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 PRDM11Q9NQV5 511 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 PTGS1P23219 599 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 GJC1P36383 396 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 CAPZA3Q96KX2 299 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 TRIM21P19474 475 aaKnown RBP18.52■□□□□ 0.56
SSRP1-202ENST00000293880 USP16Q9Y5T5 823 aa18.52■□□□□ 0.56
SSRP1-202ENST00000293880 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.55
SSRP1-202ENST00000293880 SMIM23A6NLE4 172 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 CTAGE5O15320 804 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 CEP112Q8N8E3 955 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 CATIPQ7Z7H3 387 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 GSDMDP57764 484 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 SYCP3Q8IZU3 236 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms