RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
SNF8-201ENST00000290330 ST5P78524 1137 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 HLFQ16534 295 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
SNF8-201ENST00000290330 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNF8-201ENST00000290330 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 RNF181Q9P0P0 153 aa13.75□□□□□ -0.21
SNF8-201ENST00000290330 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNF8-201ENST00000290330 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
SNF8-201ENST00000290330 SRGNP10124 158 aa13.74□□□□□ -0.21
SNF8-201ENST00000290330 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
SNF8-201ENST00000290330 LAMB4A4D0S4 1761 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 MYL6BP14649 208 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 RASSF7Q02833 373 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
SNF8-201ENST00000290330 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 MAP3K15Q6ZN16 1313 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 C21orf2O43822 256 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 PRELPP51888 382 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 NMRK2Q9NPI5 230 aa13.72□□□□□ -0.21
SNF8-201ENST00000290330 KLRG2A4D1S0 409 aaPredicted RBP13.71□□□□□ -0.21
SNF8-201ENST00000290330 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 NFKBIEO00221 500 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 CHL1O00533 1208 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
SNF8-201ENST00000290330 LMNB1P20700 586 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
SNF8-201ENST00000290330 PDIA6Q15084 440 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 MASTLQ96GX5 879 aa13.71□□□□□ -0.21
SNF8-201ENST00000290330 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
SNF8-201ENST00000290330 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
SNF8-201ENST00000290330 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
SNF8-201ENST00000290330 KDM2BQ8NHM5 1336 aa13.69□□□□□ -0.22
SNF8-201ENST00000290330 ZC3H4Q9UPT8 1303 aaKnown RBP13.69□□□□□ -0.22
SNF8-201ENST00000290330 TOMM70O94826 608 aa13.69□□□□□ -0.22
SNF8-201ENST00000290330 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
SNF8-201ENST00000290330 SBF1O95248 1867 aa13.68□□□□□ -0.22
SNF8-201ENST00000290330 ZNF316A6NFI3 1004 aaPredicted RBP13.68□□□□□ -0.22
SNF8-201ENST00000290330 NPR1P16066 1061 aa13.68□□□□□ -0.22
SNF8-201ENST00000290330 GTF2E1P29083 439 aaPredicted RBP13.68□□□□□ -0.22
SNF8-201ENST00000290330 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
SNF8-201ENST00000290330 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
SNF8-201ENST00000290330 GIGYF2Q6Y7W6 1299 aaKnown RBP13.68□□□□□ -0.22
SNF8-201ENST00000290330 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
SNF8-201ENST00000290330 NYXQ9GZU5 481 aa13.68□□□□□ -0.22
SNF8-201ENST00000290330 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
SNF8-201ENST00000290330 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 APAF1O14727 1248 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 ANXA1P04083 346 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 HSPA6P17066 643 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 GPTP24298 496 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 NUTM1Q86Y26 1132 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 C7orf43Q8WVR3 580 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 NECTIN2Q92692 538 aa13.67□□□□□ -0.22
SNF8-201ENST00000290330 LTBP3Q9NS15 1303 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 SOGA3Q5TF21 947 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 TAOK3Q9H2K8 898 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 ABCC12Q96J65 1359 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 SLX4Q8IY92 1834 aa13.66□□□□□ -0.22
SNF8-201ENST00000290330 GLTPD2A6NH11 291 aa13.65□□□□□ -0.22
SNF8-201ENST00000290330 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
SNF8-201ENST00000290330 CCDC184Q52MB2 194 aa13.65□□□□□ -0.22
SNF8-201ENST00000290330 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
SNF8-201ENST00000290330 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNF8-201ENST00000290330 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.22
SNF8-201ENST00000290330 NTSR2O95665 410 aa13.64□□□□□ -0.23
SNF8-201ENST00000290330 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
SNF8-201ENST00000290330 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
SNF8-201ENST00000290330 PARP10Q53GL7 1025 aa13.64□□□□□ -0.23
SNF8-201ENST00000290330 RBM46Q8TBY0 533 aaKnown RBP13.64□□□□□ -0.23
SNF8-201ENST00000290330 XAGE3Q8WTP9 111 aa13.64□□□□□ -0.23
SNF8-201ENST00000290330 NUP98P52948 1817 aa13.64□□□□□ -0.23
SNF8-201ENST00000290330 HOXB7P09629 217 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 CCDC93Q567U6 631 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
SNF8-201ENST00000290330 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 RIC1Q4ADV7 1423 aa13.63□□□□□ -0.23
SNF8-201ENST00000290330 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
SNF8-201ENST00000290330 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
SNF8-201ENST00000290330 OLFM4Q6UX06 510 aa13.62□□□□□ -0.23
SNF8-201ENST00000290330 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms