RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 GCOM1H8Y6P7 765 aaPredicted RBP9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 MYZAPP0CAP1 466 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 MX1P20591 662 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 KIF4AO95239 1232 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 FAM114A1Q8IWE2 563 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 CENPHQ9H3R5 247 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 NFE2L2Q16236 605 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 DDX46Q7L014 1031 aaKnown RBP9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 POTEDQ86YR6 584 aa9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 PPP1R1BQ9UD71 204 aaPredicted RBP9.65□□□□□ -0.86
CACNA1D-201ENST00000288139 ZNF500O60304 480 aaPredicted RBP9.65□□□□□ -0.87
CACNA1D-201ENST00000288139 MYH11P35749 1972 aa9.65□□□□□ -0.87
CACNA1D-201ENST00000288139 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 CACYBPQ9HB71 228 aaKnown RBP9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 MAST1Q9Y2H9 1570 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 B4GALNT4Q76KP1 1039 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 ANKS4BQ8N8V4 417 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 TTC14Q96N46 770 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 RAD54L2Q9Y4B4 1467 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 ARHGEF5Q12774 1597 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 KIF5AQ12840 1032 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 CEP128Q6ZU80 1094 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 TSPYL4Q9UJ04 414 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 NSD3Q9BZ95 1437 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 KCNG4Q8TDN1 519 aa9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 IQSEC3Q9UPP2 1182 aaPredicted RBP9.64□□□□□ -0.87
CACNA1D-201ENST00000288139 IFI16Q16666 785 aaKnown RBP9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 ATP8B1O43520 1251 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 PLVAPQ9BX97 442 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 SH3BP5O60239 455 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 NUCB1Q02818 461 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 GGT6Q6P531 493 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 MYH9P35579 1960 aaKnown RBP9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 PRPHP41219 470 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 A0A1B0GUA9 196 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 MYRIPQ8NFW9 859 aa9.63□□□□□ -0.87
CACNA1D-201ENST00000288139 KIF3CO14782 793 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 CCDC57Q2TAC2 916 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 SMARCC1Q92922 1105 aaPredicted RBP9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 PDRG1Q9NUG6 133 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 WDR62O43379 1518 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 TNNT1P13805 278 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 ZNF165P49910 485 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 SCLT1Q96NL6 688 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 NSRP1Q9H0G5 558 aaKnown RBP9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 ZNF287Q9HBT7 754 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 STX6O43752 255 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 SNW1Q13573 536 aaKnown RBP9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 ERO1AQ96HE7 468 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 RAB34Q9BZG1 259 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 IMPACTQ9P2X3 320 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 PPP1R2P41236 205 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 USH1CQ9Y6N9 552 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 LRRC27Q9C0I9 530 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 ASXL2Q76L83 1435 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 SMC6Q96SB8 1091 aa9.62□□□□□ -0.87
CACNA1D-201ENST00000288139 TOP1P11387 765 aaKnown RBP9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 PAFAH1B1P43034 410 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 SPA17Q15506 151 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 RASSF4Q9H2L5 321 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 TRAPPC8Q9Y2L5 1435 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 TTC41PQ6P2S7 1318 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 ARHGAP25P42331 645 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 PSMD1Q99460 953 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 PPIP5K1Q6PFW1 1433 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 YEATS4O95619 227 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 SNX16P57768 344 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 GMNNO75496 209 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 PPFIBP2Q8ND30 876 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 TAF4BQ92750 862 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 NOB1Q9ULX3 412 aaKnown RBP9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 SETSIPP0DME0 302 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 ZSCAN23Q3MJ62 389 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 EBAG9O00559 213 aa9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 IRX3P78415 501 aaPredicted RBP9.61□□□□□ -0.87
CACNA1D-201ENST00000288139 NAP1L3Q99457 506 aaPredicted RBP9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 SURF6O75683 361 aaKnown RBP9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 ADCY5O95622 1261 aa9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 NBPF8Q3BBV2 869 aa9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 RTEL1-TNFRSF6BF6WH68 1400 aa9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 TMPOP42166 694 aaKnown RBP9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 SATB1Q01826 763 aa9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 LAMC1P11047 1609 aa9.6□□□□□ -0.87
CACNA1D-201ENST00000288139 HSPA4P34932 840 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms