RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 STK38Q15208 465 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 KLHL40Q2TBA0 621 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
CNOT9-201ENST00000273064 KINO60870 393 aaKnown RBP17.31■□□□□ 0.36
CNOT9-201ENST00000273064 NUP133Q8WUM0 1156 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 FAM227BQ96M60 508 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 CCDC129Q6ZRS4 1044 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 BRF1Q92994 677 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 TMOD3Q9NYL9 352 aa17.31■□□□□ 0.36
CNOT9-201ENST00000273064 DNM1Q05193 864 aaKnown RBP17.3■□□□□ 0.36
CNOT9-201ENST00000273064 NMIQ13287 307 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-201ENST00000273064 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
CNOT9-201ENST00000273064 SLC4A8Q2Y0W8 1093 aa17.3■□□□□ 0.36
CNOT9-201ENST00000273064 USP48Q86UV5 1035 aa17.3■□□□□ 0.36
CNOT9-201ENST00000273064 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
CNOT9-201ENST00000273064 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-201ENST00000273064 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-201ENST00000273064 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-201ENST00000273064 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
CNOT9-201ENST00000273064 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
CNOT9-201ENST00000273064 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
CNOT9-201ENST00000273064 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
CNOT9-201ENST00000273064 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
CNOT9-201ENST00000273064 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
CNOT9-201ENST00000273064 DHX16O60231 1041 aaKnown RBP17.28■□□□□ 0.36
CNOT9-201ENST00000273064 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-201ENST00000273064 A1BGP04217 495 aa17.28■□□□□ 0.36
CNOT9-201ENST00000273064 TPM4P67936 248 aa17.28■□□□□ 0.36
CNOT9-201ENST00000273064 LINS1Q8NG48 757 aa17.28■□□□□ 0.36
CNOT9-201ENST00000273064 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-201ENST00000273064 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-201ENST00000273064 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-201ENST00000273064 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
CNOT9-201ENST00000273064 NUP62CLQ9H1M0 184 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 MYOM2P54296 1465 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 G3V3G9 751 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 CCDC192P0DO97 292 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 CDK11BP21127 795 aaKnown RBP17.27■□□□□ 0.36
CNOT9-201ENST00000273064 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.36
CNOT9-201ENST00000273064 POLR3DP05423 398 aaPredicted RBP17.27■□□□□ 0.35
CNOT9-201ENST00000273064 TFCP2Q12800 502 aa17.27■□□□□ 0.35
CNOT9-201ENST00000273064 ZSCAN30Q86W11 494 aa17.27■□□□□ 0.35
CNOT9-201ENST00000273064 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.35
CNOT9-201ENST00000273064 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
CNOT9-201ENST00000273064 SBNO1A3KN83 1393 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 ERICH2A1L162 156 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 SMC2O95347 1197 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 SUCLG2Q96I99 432 aa17.26■□□□□ 0.35
CNOT9-201ENST00000273064 E9PCH4 1651 aa17.25■□□□□ 0.35
CNOT9-201ENST00000273064 ZNF853P0CG23 659 aa17.25■□□□□ 0.35
CNOT9-201ENST00000273064 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
CNOT9-201ENST00000273064 TPD52L1Q16890 204 aaPredicted RBP17.25■□□□□ 0.35
CNOT9-201ENST00000273064 BIN1O00499 593 aa17.25■□□□□ 0.35
CNOT9-201ENST00000273064 ZNF790Q6PG37 636 aa17.25■□□□□ 0.35
CNOT9-201ENST00000273064 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
CNOT9-201ENST00000273064 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
CNOT9-201ENST00000273064 CROCC2H7BZ55 1655 aa17.25■□□□□ 0.35
CNOT9-201ENST00000273064 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
CNOT9-201ENST00000273064 KIF1BO60333 1816 aa17.24■□□□□ 0.35
CNOT9-201ENST00000273064 FAM89AQ96GI7 184 aa17.24■□□□□ 0.35
CNOT9-201ENST00000273064 PDILTQ8N807 584 aa17.24■□□□□ 0.35
CNOT9-201ENST00000273064 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
CNOT9-201ENST00000273064 EFCAB6Q5THR3 1501 aa17.24■□□□□ 0.35
CNOT9-201ENST00000273064 ABCC3O15438 1527 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
CNOT9-201ENST00000273064 ANTXR1Q9H6X2 564 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 GADD45BO75293 160 aaPredicted RBP17.23■□□□□ 0.35
CNOT9-201ENST00000273064 SYT1P21579 422 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
CNOT9-201ENST00000273064 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
CNOT9-201ENST00000273064 NEO1Q92859 1461 aa17.23■□□□□ 0.35
CNOT9-201ENST00000273064 STARD3NLO95772 234 aa17.22■□□□□ 0.35
CNOT9-201ENST00000273064 NEK1Q96PY6 1258 aa17.22■□□□□ 0.35
CNOT9-201ENST00000273064 MAP3K4Q9Y6R4 1608 aa17.22■□□□□ 0.35
CNOT9-201ENST00000273064 TDO2P48775 406 aa17.22■□□□□ 0.35
CNOT9-201ENST00000273064 ZCRB1Q8TBF4 217 aaKnown RBP17.22■□□□□ 0.35
CNOT9-201ENST00000273064 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
CNOT9-201ENST00000273064 TTC12Q9H892 705 aaPredicted RBP17.22■□□□□ 0.35
CNOT9-201ENST00000273064 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
CNOT9-201ENST00000273064 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
CNOT9-201ENST00000273064 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
CNOT9-201ENST00000273064 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
CNOT9-201ENST00000273064 PLXNC1O60486 1568 aa17.21■□□□□ 0.35
CNOT9-201ENST00000273064 MARCH6O60337 910 aa17.21■□□□□ 0.35
CNOT9-201ENST00000273064 RXRAP19793 462 aa17.21■□□□□ 0.35
CNOT9-201ENST00000273064 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
CNOT9-201ENST00000273064 RAI14Q9P0K7 980 aa17.21■□□□□ 0.35
CNOT9-201ENST00000273064 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
CNOT9-201ENST00000273064 UNC13BO14795 1591 aa17.21■□□□□ 0.34
CNOT9-201ENST00000273064 AIDAQ96BJ3 306 aa17.21■□□□□ 0.34
CNOT9-201ENST00000273064 SEC62Q99442 399 aaKnown RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms