RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
TRIM43-201ENST00000272395 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
TRIM43-201ENST00000272395 CACNA1FO60840 1977 aa10.84□□□□□ -0.67
TRIM43-201ENST00000272395 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
TRIM43-201ENST00000272395 CRKLP46109 303 aaKnown RBP10.83□□□□□ -0.68
TRIM43-201ENST00000272395 PIP4K2AP48426 406 aaPredicted RBP10.83□□□□□ -0.68
TRIM43-201ENST00000272395 R3HDM1Q15032 1099 aaKnown RBP10.83□□□□□ -0.68
TRIM43-201ENST00000272395 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
TRIM43-201ENST00000272395 BABAM1Q9NWV8 329 aa10.83□□□□□ -0.68
TRIM43-201ENST00000272395 STK32BQ9NY57 414 aa10.83□□□□□ -0.68
TRIM43-201ENST00000272395 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
TRIM43-201ENST00000272395 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
TRIM43-201ENST00000272395 KDM3BQ7LBC6 1761 aa10.83□□□□□ -0.68
TRIM43-201ENST00000272395 TJP1Q07157 1748 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 ELL2O00472 640 aaPredicted RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 GNPATO15228 680 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 GIGYF1O75420 1035 aaPredicted RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 PHF14O94880 888 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 MFAP1P55081 439 aaKnown RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 INTS5Q6P9B9 1019 aaKnown RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 C8orf58Q8NAV2 365 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 NECTIN2Q92692 538 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 SNX21Q969T3 373 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 AK7Q96M32 723 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 SLKQ9H2G2 1235 aaPredicted RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 CHMP5Q9NZZ3 219 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 A1BGP04217 495 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 HSCBQ8IWL3 235 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 TSPYL6Q8N831 410 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 PDGFDQ9GZP0 370 aaPredicted RBP10.82□□□□□ -0.68
TRIM43-201ENST00000272395 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
TRIM43-201ENST00000272395 C5P01031 1676 aa10.81□□□□□ -0.68
TRIM43-201ENST00000272395 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
TRIM43-201ENST00000272395 LNPKQ9C0E8 428 aa10.81□□□□□ -0.68
TRIM43-201ENST00000272395 CCDC87Q9NVE4 849 aa10.81□□□□□ -0.68
TRIM43-201ENST00000272395 ZBTB1Q9Y2K1 713 aa10.81□□□□□ -0.68
TRIM43-201ENST00000272395 C4BP0C0L5 1744 aa10.81□□□□□ -0.68
TRIM43-201ENST00000272395 CNTNAP4Q9C0A0 1308 aa10.8□□□□□ -0.68
TRIM43-201ENST00000272395 STARD3NLO95772 234 aa10.8□□□□□ -0.68
TRIM43-201ENST00000272395 EIF2S2P20042 333 aaKnown RBP10.8□□□□□ -0.68
TRIM43-201ENST00000272395 PNPLA7Q6ZV29 1317 aa10.8□□□□□ -0.68
TRIM43-201ENST00000272395 L1TD1Q5T7N2 865 aaKnown RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 ANKRD45Q5TZF3 282 aa10.79□□□□□ -0.68
TRIM43-201ENST00000272395 TEX13AQ9BXU3 409 aaPredicted RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 ZNF330Q9Y3S2 320 aaPredicted RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 PTPRCP08575 1304 aa10.79□□□□□ -0.68
TRIM43-201ENST00000272395 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
TRIM43-201ENST00000272395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
TRIM43-201ENST00000272395 RC3H1Q5TC82 1133 aaKnown RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 COL23A1Q86Y22 540 aaPredicted RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
TRIM43-201ENST00000272395 CIZ1Q9ULV3 898 aaPredicted RBP10.79□□□□□ -0.68
TRIM43-201ENST00000272395 N4BP2Q86UW6 1770 aaPredicted RBP10.78□□□□□ -0.68
TRIM43-201ENST00000272395 CICQ96RK0 1608 aaPredicted RBP10.78□□□□□ -0.68
TRIM43-201ENST00000272395 COL5A3P25940 1745 aaPredicted RBP10.78□□□□□ -0.68
TRIM43-201ENST00000272395 ZBTB22O15209 634 aa10.78□□□□□ -0.68
TRIM43-201ENST00000272395 RPS6KA4O75676 772 aa10.78□□□□□ -0.68
TRIM43-201ENST00000272395 ANXA1P04083 346 aa10.78□□□□□ -0.68
TRIM43-201ENST00000272395 PROSER3Q2NL68 480 aa10.78□□□□□ -0.68
TRIM43-201ENST00000272395 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
TRIM43-201ENST00000272395 RTCBQ9Y3I0 505 aaKnown RBP10.78□□□□□ -0.68
TRIM43-201ENST00000272395 SOS1Q07889 1333 aaPredicted RBP10.77□□□□□ -0.68
TRIM43-201ENST00000272395 TAF1LQ8IZX4 1826 aa10.77□□□□□ -0.68
TRIM43-201ENST00000272395 MYL6BP14649 208 aa10.77□□□□□ -0.69
TRIM43-201ENST00000272395 MCM4P33991 863 aa10.77□□□□□ -0.69
TRIM43-201ENST00000272395 HDGFL1Q5TGJ6 251 aa10.77□□□□□ -0.69
TRIM43-201ENST00000272395 SIRT2Q8IXJ6 389 aa10.77□□□□□ -0.69
TRIM43-201ENST00000272395 DCTPP1Q9H773 170 aa10.77□□□□□ -0.69
TRIM43-201ENST00000272395 DDX11L8A8MPP1 907 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 CDC45O75419 566 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 DDIT3P35638 169 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 RPAP2Q8IXW5 612 aaPredicted RBP10.76□□□□□ -0.69
TRIM43-201ENST00000272395 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
TRIM43-201ENST00000272395 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 SRP68Q9UHB9 627 aaKnown RBP10.76□□□□□ -0.69
TRIM43-201ENST00000272395 ZBTB7AO95365 584 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 PTMSP20962 102 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 SSFA2P28290 1259 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 EIF5P55010 431 aaKnown RBP10.76□□□□□ -0.69
TRIM43-201ENST00000272395 PDIA6Q15084 440 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 MSL1Q68DK7 614 aa10.76□□□□□ -0.69
TRIM43-201ENST00000272395 ATP10DQ9P241 1426 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 COL15A1P39059 1388 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 HOXB7P09629 217 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 TRAPPC3LQ5T215 181 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 TBC1D9Q6ZT07 1266 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 ANKRD44Q8N8A2 993 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 ARXQ96QS3 562 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 TBC1D2BQ9UPU7 963 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 TUBGCP6Q96RT7 1819 aa10.75□□□□□ -0.69
TRIM43-201ENST00000272395 MYH14Q7Z406 1995 aaKnown RBP10.75□□□□□ -0.69
TRIM43-201ENST00000272395 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
TRIM43-201ENST00000272395 RFC4P35249 363 aa10.74□□□□□ -0.69
TRIM43-201ENST00000272395 IL6STP40189 918 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms