RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 PRPF40BQ6NWY9 871 aaKnown RBP13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 RAD50Q92878 1312 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 HOXB7P09629 217 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 CLCN1P35523 988 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 MCM2P49736 904 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 ANP32BQ92688 251 aaKnown RBP13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
PRUNE1-201ENST00000271620 LARGE1O95461 756 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 PXDNLA1KZ92 1463 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 GRM8O00222 908 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
PRUNE1-201ENST00000271620 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.31
PRUNE1-201ENST00000271620 ZNF445P59923 1031 aa13.08□□□□□ -0.31
PRUNE1-201ENST00000271620 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.31
PRUNE1-201ENST00000271620 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.31
PRUNE1-201ENST00000271620 SASH1O94885 1247 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 ZNF790Q6PG37 636 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 RUFY3Q7L099 469 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 COPS6Q7L5N1 327 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 IGKV5-2P06315 115 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 PDIA6Q15084 440 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 JAKMIP1Q96N16 626 aaKnown RBP13.08□□□□□ -0.32
PRUNE1-201ENST00000271620 ERBB3P21860 1342 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 AOX1Q06278 1338 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 CHGBP05060 677 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 KCNJ4P48050 445 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 EPHA10Q5JZY3 1008 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 MPNDQ8N594 471 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 XAGE3Q8WTP9 111 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 MYD88Q99836 296 aa13.07□□□□□ -0.32
PRUNE1-201ENST00000271620 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 LINS1Q8NG48 757 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 INTS4Q96HW7 963 aaKnown RBP13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 HYPKQ9NX55 129 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
PRUNE1-201ENST00000271620 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
PRUNE1-201ENST00000271620 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
PRUNE1-201ENST00000271620 TTC14Q96N46 770 aa13.05□□□□□ -0.32
PRUNE1-201ENST00000271620 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
PRUNE1-201ENST00000271620 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
PRUNE1-201ENST00000271620 MTX1Q13505 466 aa13.05□□□□□ -0.32
PRUNE1-201ENST00000271620 FIBPO43427 364 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 SYT1P21579 422 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 LIMCH1Q9UPQ0 1083 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 LRSAM1Q6UWE0 723 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 CHMP4AQ9BY43 222 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
PRUNE1-201ENST00000271620 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 SMC3Q9UQE7 1217 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 UBE3BQ7Z3V4 1068 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 RPAP1Q9BWH6 1393 aaPredicted RBP13.03□□□□□ -0.32
PRUNE1-201ENST00000271620 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.32
PRUNE1-201ENST00000271620 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.32
PRUNE1-201ENST00000271620 TCHHQ07283 1943 aa13.02□□□□□ -0.32
PRUNE1-201ENST00000271620 STX6O43752 255 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 PHKG2P15735 406 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 GJB2P29033 226 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 EVI5LQ96CN4 794 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 C19orf44Q9H6X5 657 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 KDM3BQ7LBC6 1761 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 VPS37CA5D8V6 355 aaPredicted RBP13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 CYP27B1O15528 508 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 GCKRQ14397 625 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
PRUNE1-201ENST00000271620 ZNF589Q86UQ0 364 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms