RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
LAMA3-201ENST00000269217 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
LAMA3-201ENST00000269217 CACNA2D4Q7Z3S7 1137 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
LAMA3-201ENST00000269217 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
LAMA3-201ENST00000269217 TMOD2Q9NZR1 351 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 MAPKBP1O60336 1514 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 FAM83GA6ND36 823 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 GOLIM4O00461 696 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 ZNF165P49910 485 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 FBXO31Q5XUX0 539 aaPredicted RBP11.83□□□□□ -0.52
LAMA3-201ENST00000269217 CATIPQ7Z7H3 387 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 ZSCAN16Q9H4T2 348 aaPredicted RBP11.83□□□□□ -0.52
LAMA3-201ENST00000269217 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 FANCAO15360 1455 aa11.83□□□□□ -0.52
LAMA3-201ENST00000269217 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 YEATS4O95619 227 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 TMEM266Q2M3C6 531 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 AEBP2Q6ZN18 517 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 CCDC194A0A1B0GVG4 234 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 DESP17661 470 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 SDSP20132 328 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 ZNF444Q8N0Y2 327 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 C16orf45Q96MC5 204 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 MPHOSPH10O00566 681 aaKnown RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 KIF20AO95235 890 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 IARSP41252 1262 aaKnown RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 ANAPC15P60006 121 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 NLRP5P59047 1200 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 CCDC82Q8N4S0 544 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 CWC25Q9NXE8 425 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 CETN2P41208 172 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 TNIP1Q15025 636 aa11.82□□□□□ -0.52
LAMA3-201ENST00000269217 PYM1Q9BRP8 204 aaKnown RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 ORC3Q9UBD5 711 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-201ENST00000269217 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 TMC6Q7Z403 805 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 PAF1Q8N7H5 531 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-201ENST00000269217 IFNL2Q8IZJ0 200 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 ANKRD44Q8N8A2 993 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-201ENST00000269217 TRMT1Q9NXH9 659 aaKnown RBP11.81□□□□□ -0.52
LAMA3-201ENST00000269217 ZPR1O75312 459 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 NCOA7Q8NI08 942 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-201ENST00000269217 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 FOXO3O43524 673 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 SNX21Q969T3 373 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 KDM5BQ9UGL1 1544 aa11.81□□□□□ -0.52
LAMA3-201ENST00000269217 PAFAH1B1P43034 410 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 TSHZ3Q63HK5 1081 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 CRACR2BQ8N4Y2 399 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-201ENST00000269217 UGGT2Q9NYU1 1516 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 ACEP12821 1306 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 EZRP15311 586 aaKnown RBP11.8□□□□□ -0.52
LAMA3-201ENST00000269217 CBX1P83916 185 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 TMEM67Q5HYA8 995 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 PDE1AP54750 535 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 CCDC150Q8NCX0 1101 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 MATR3P43243 847 aaKnown RBP eCLIP11.8□□□□□ -0.52
LAMA3-201ENST00000269217 MEIS3Q99687 375 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 BIN1O00499 593 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.52
LAMA3-201ENST00000269217 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
LAMA3-201ENST00000269217 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
LAMA3-201ENST00000269217 CCDC102BQ68D86 513 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 SLF2Q8IX21 1173 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 LUZP1Q86V48 1076 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 CCDC12Q8WUD4 166 aaPredicted RBP11.79□□□□□ -0.52
LAMA3-201ENST00000269217 CPLX3Q8WVH0 158 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 KIF5BP33176 963 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 SNW1Q13573 536 aaKnown RBP11.79□□□□□ -0.52
LAMA3-201ENST00000269217 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
LAMA3-201ENST00000269217 ITSN2Q9NZM3 1697 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 PRAG1Q86YV5 1406 aa11.79□□□□□ -0.52
LAMA3-201ENST00000269217 AMPD3Q01432 767 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms