RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 RALBP1Q15311 655 aa9.35□□□□□ -0.91
SMARCE1-201ENST00000264640 FAM161AQ3B820 660 aa9.35□□□□□ -0.91
SMARCE1-201ENST00000264640 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
SMARCE1-201ENST00000264640 PIGBQ92521 554 aa9.35□□□□□ -0.91
SMARCE1-201ENST00000264640 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
SMARCE1-201ENST00000264640 CGNL1Q0VF96 1302 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 KCNA3P22001 575 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 RASSF7Q02833 373 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 POLR3GLQ9BT43 218 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 DLEC1Q9Y238 1755 aa9.34□□□□□ -0.91
SMARCE1-201ENST00000264640 AFDNP55196 1824 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 FOXN1O15353 648 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 HMGB2P26583 209 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 TMF1P82094 1093 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 COG3Q96JB2 828 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 RTL1A6NKG5 1358 aa9.33□□□□□ -0.92
SMARCE1-201ENST00000264640 CHRNA5P30532 468 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 DALRD3Q5D0E6 543 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 PPP4R2Q9NY27 417 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 TERF2IPQ9NYB0 399 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 PIM2Q9P1W9 311 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 PARP3Q9Y6F1 533 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 DICER1Q9UPY3 1922 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
SMARCE1-201ENST00000264640 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
SMARCE1-201ENST00000264640 TRAPPC3LQ5T215 181 aa9.31□□□□□ -0.92
SMARCE1-201ENST00000264640 NLGN1Q8N2Q7 840 aa9.31□□□□□ -0.92
SMARCE1-201ENST00000264640 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.922e-8■■■■■ 30.3
SMARCE1-201ENST00000264640 STK24Q9Y6E0 443 aa9.31□□□□□ -0.92
SMARCE1-201ENST00000264640 KDRP35968 1356 aa9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 GYS1P13807 737 aa9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 VEGFAP15692 232 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 TMOD3Q9NYL9 352 aa9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 RTCBQ9Y3I0 505 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 MYBBP1AQ9BQG0 1328 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-201ENST00000264640 TJP1Q07157 1748 aa9.29□□□□□ -0.92
SMARCE1-201ENST00000264640 ST20-MTHFSA0A0A6YYL1 179 aa9.29□□□□□ -0.92
SMARCE1-201ENST00000264640 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
SMARCE1-201ENST00000264640 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
SMARCE1-201ENST00000264640 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
SMARCE1-201ENST00000264640 ANKRD26Q9UPS8 1709 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 GLTPD2A6NH11 291 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 RFC4P35249 363 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 DDR1Q08345 913 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 ABHD8Q96I13 439 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 ATG3Q9NT62 314 aa9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-201ENST00000264640 INSRP06213 1382 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 LBX1P52954 281 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 AIDAQ96BJ3 306 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 PRDM10Q9NQV6 1147 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 NUDCQ9Y266 331 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 FER1L6Q2WGJ9 1857 aa9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 ZC3H4Q9UPT8 1303 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 TNRC18O15417 2968 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-201ENST00000264640 FLT4P35916 1363 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 CNTNAP1P78357 1384 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 COL11A2P13942 1736 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 NRXN2Q9P2S2 1712 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 POTECB2RU33 542 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 STK25O00506 426 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 LMNB1P20700 586 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 CTCFP49711 727 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
SMARCE1-201ENST00000264640 ANKRD31Q8N7Z5 1873 aa9.25□□□□□ -0.93
SMARCE1-201ENST00000264640 SPG7Q9UQ90 795 aa9.25□□□□□ -0.93
SMARCE1-201ENST00000264640 CNTNAP4Q9C0A0 1308 aa9.25□□□□□ -0.93
SMARCE1-201ENST00000264640 NCAPD2Q15021 1401 aa9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 VEGFBP49765 207 aa9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 LSM11P83369 360 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 PNISRQ8TF01 805 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-201ENST00000264640 CCDC85CA6NKD9 419 aa9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 NFKBIEO00221 500 aa9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 POLRMTO00411 1230 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 PHKG2P15735 406 aa9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 PDE4DIPQ5VU43 2346 aa9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 SCN4AP35499 1836 aa9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-201ENST00000264640 FYB1O15117 783 aa9.22□□□□□ -0.93
SMARCE1-201ENST00000264640 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms