RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 DNAJC2Q99543 621 aaKnown RBP10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 TOMM22Q9NS69 142 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 ISY1Q9ULR0 285 aaKnown RBP10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 KDRP35968 1356 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.83e-7■■□□□ 13.8
GTF3C3-201ENST00000263956 FSD1Q9BTV5 496 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 REC8O95072 547 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 LMBR1LQ6UX01 489 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 PALLDQ8WX93 1383 aa10.08□□□□□ -0.8
GTF3C3-201ENST00000263956 HEG1Q9ULI3 1381 aa10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 IRS4O14654 1257 aaPredicted RBP10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 APPP05067 770 aa10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 CRKLP46109 303 aaKnown RBP10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 HSCBQ8IWL3 235 aa10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 SH3TC1Q8TE82 1336 aa10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 ZNF521Q96K83 1311 aa10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 XRN1Q8IZH2 1706 aaKnown RBP10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 CNBD1Q8NA66 436 aa10.07□□□□□ -0.8
GTF3C3-201ENST00000263956 CAVIN4Q5BKX8 364 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 ATG3Q9NT62 314 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 HIP1O00291 1037 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 SLC5A1P13866 664 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 TCIRG1Q13488 830 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 TRMT2AQ8IZ69 625 aaKnown RBP10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■□□□ 11.5
GTF3C3-201ENST00000263956 ZBTB1Q9Y2K1 713 aa10.06□□□□□ -0.8
GTF3C3-201ENST00000263956 ATP8B2P98198 1209 aa10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 TNNQ9UQP3 1299 aa10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 CDC45O75419 566 aa10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 ZNF219Q9P2Y4 722 aaPredicted RBP10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 CHD2O14647 1828 aaKnown RBP10.05□□□□□ -0.8
GTF3C3-201ENST00000263956 RLBP1P12271 317 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 TTLL7Q6ZT98 887 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 FNBP4Q8N3X1 1017 aaPredicted RBP10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 FMN2Q9NZ56 1722 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 KCNQ2O43526 872 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 FKBP4Q02790 459 aaKnown RBP eCLIP10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 ZKSCAN1P17029 563 aaPredicted RBP10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 ZSCAN25Q6NSZ9 544 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 NWD1Q149M9 1564 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 NLGN1Q8N2Q7 840 aa10.04□□□□□ -0.8
GTF3C3-201ENST00000263956 MAP3K15Q6ZN16 1313 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 PDE4AP27815 886 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 KCNQ4P56696 695 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 GCKRQ14397 625 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 NUTM1Q86Y26 1132 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 PRAMEF22A3QJZ6 481 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 PDE8AO60658 829 aa10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 GLRX3O76003 335 aaKnown RBP10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
GTF3C3-201ENST00000263956 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.8
GTF3C3-201ENST00000263956 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.8
GTF3C3-201ENST00000263956 CHAF1AQ13111 956 aaPredicted RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 HCLS1P14317 486 aaPredicted RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 MX1P20591 662 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 PROSER3Q2NL68 480 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 ZBTB40Q9NUA8 1239 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 LRP2BPQ9P2M1 347 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 RPS6KA4O75676 772 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 TRDNQ13061 729 aa10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 HDAC1Q13547 482 aaPredicted RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
GTF3C3-201ENST00000263956 ZBTB7BO15156 539 aaPredicted RBP10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 RBM17Q96I25 401 aaKnown RBP10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 PXDNQ92626 1479 aa10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 NEURL1BA8MQ27 555 aa10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 RHPN1Q8TCX5 695 aa10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 TXNRD1Q16881 649 aa10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 ABCF2Q9UG63 623 aa10.01□□□□□ -0.81
GTF3C3-201ENST00000263956 ST18O60284 1047 aa10□□□□□ -0.81
GTF3C3-201ENST00000263956 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
GTF3C3-201ENST00000263956 KIF20BQ96Q89 1820 aa10□□□□□ -0.81
GTF3C3-201ENST00000263956 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
GTF3C3-201ENST00000263956 CEP85Q6P2H3 762 aa10□□□□□ -0.81
GTF3C3-201ENST00000263956 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
GTF3C3-201ENST00000263956 BRPF1P55201 1214 aaPredicted RBP10□□□□□ -0.81
GTF3C3-201ENST00000263956 ATP2B3Q16720 1220 aa10□□□□□ -0.81
GTF3C3-201ENST00000263956 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms