RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ADCY5O95622 1261 aa19.91■□□□□ 0.78
ZNF541-201ENST00000263351 GJB2P29033 226 aa19.91■□□□□ 0.78
ZNF541-201ENST00000263351 EIF4A1P60842 406 aaKnown RBP19.91■□□□□ 0.78
ZNF541-201ENST00000263351 DNAAF4Q8WXU2 420 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 TLR7Q9NYK1 1049 aaKnown RBP19.9■□□□□ 0.78
ZNF541-201ENST00000263351 NDUFB9Q9Y6M9 179 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 GLIPR1L2Q4G1C9 344 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 DNTTIP2Q5QJE6 756 aaKnown RBP19.9■□□□□ 0.78
ZNF541-201ENST00000263351 KIF1BPQ96EK5 621 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 SIL1Q9H173 461 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 PDCL3Q9H2J4 239 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 HYPKQ9NX55 129 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 SMC3Q9UQE7 1217 aa19.9■□□□□ 0.78
ZNF541-201ENST00000263351 F13A1P00488 732 aa19.89■□□□□ 0.77
ZNF541-201ENST00000263351 EDC3Q96F86 508 aaKnown RBP19.89■□□□□ 0.77
ZNF541-201ENST00000263351 CCDC8Q9H0W5 538 aaPredicted RBP19.89■□□□□ 0.77
ZNF541-201ENST00000263351 ADCY9O60503 1353 aa19.89■□□□□ 0.77
ZNF541-201ENST00000263351 PLEKHG1Q9ULL1 1385 aa19.89■□□□□ 0.77
ZNF541-201ENST00000263351 LRRC37A3O60309 1634 aa19.89■□□□□ 0.77
ZNF541-201ENST00000263351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.89■□□□□ 0.77
ZNF541-201ENST00000263351 CNTROBQ8N137 903 aa19.89■□□□□ 0.77
ZNF541-201ENST00000263351 LIMCH1Q9UPQ0 1083 aa19.89■□□□□ 0.77
ZNF541-201ENST00000263351 AIMP1Q12904 312 aaKnown RBP19.88■□□□□ 0.77
ZNF541-201ENST00000263351 ME3Q16798 604 aa19.88■□□□□ 0.77
ZNF541-201ENST00000263351 SPC24Q8NBT2 197 aa19.88■□□□□ 0.77
ZNF541-201ENST00000263351 DIP2AQ14689 1571 aa19.88■□□□□ 0.77
ZNF541-201ENST00000263351 CAMK4Q16566 473 aa19.88■□□□□ 0.77
ZNF541-201ENST00000263351 DIAPH3Q9NSV4 1193 aa19.88■□□□□ 0.77
ZNF541-201ENST00000263351 MAP3K2Q9Y2U5 619 aa19.87■□□□□ 0.77
ZNF541-201ENST00000263351 PIP4K2AP48426 406 aaPredicted RBP19.87■□□□□ 0.77
ZNF541-201ENST00000263351 MTMR6Q9Y217 621 aa19.87■□□□□ 0.77
ZNF541-201ENST00000263351 CCDC183Q5T5S1 534 aa19.86■□□□□ 0.77
ZNF541-201ENST00000263351 SYAP1Q96A49 352 aaPredicted RBP19.86■□□□□ 0.77
ZNF541-201ENST00000263351 PKNOX2Q96KN3 472 aa19.86■□□□□ 0.77
ZNF541-201ENST00000263351 STK3Q13188 491 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 AACSQ86V21 672 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 PDRG1Q9NUG6 133 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 TPCN1Q9ULQ1 816 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 EID1Q9Y6B2 187 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 BTBD11A6QL63 1104 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 HTATSF1O43719 755 aaKnown RBP19.85■□□□□ 0.77
ZNF541-201ENST00000263351 PPFIA3O75145 1194 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 RAB11FIP3O75154 756 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 KIAA2012Q0VF49 1180 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
ZNF541-201ENST00000263351 CDC37L1Q7L3B6 337 aa19.84■□□□□ 0.77
ZNF541-201ENST00000263351 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
ZNF541-201ENST00000263351 IL17RAQ96F46 866 aa19.84■□□□□ 0.77
ZNF541-201ENST00000263351 C9orf78Q9NZ63 289 aaPredicted RBP19.84■□□□□ 0.77
ZNF541-201ENST00000263351 CCDC9Q9Y3X0 531 aaKnown RBP19.84■□□□□ 0.77
ZNF541-201ENST00000263351 ZNF530Q6P9A1 599 aaPredicted RBP19.83■□□□□ 0.77
ZNF541-201ENST00000263351 BOLA2Q9H3K6 86 aa19.83■□□□□ 0.77
ZNF541-201ENST00000263351 AOX1Q06278 1338 aa19.83■□□□□ 0.77
ZNF541-201ENST00000263351 MARF1Q9Y4F3 1742 aaKnown RBP19.83■□□□□ 0.76
ZNF541-201ENST00000263351 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.76
ZNF541-201ENST00000263351 KAZALD1Q96I82 304 aa19.83■□□□□ 0.76
ZNF541-201ENST00000263351 TFIP11Q9UBB9 837 aaKnown RBP19.83■□□□□ 0.76
ZNF541-201ENST00000263351 PYCARDQ9ULZ3 195 aa19.83■□□□□ 0.76
ZNF541-201ENST00000263351 A0A0D9SFI3 127 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 UBE2HP62256 183 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 EAF2Q96CJ1 260 aaPredicted RBP19.82■□□□□ 0.76
ZNF541-201ENST00000263351 RBM8AQ9Y5S9 174 aaKnown RBP19.82■□□□□ 0.76
ZNF541-201ENST00000263351 RGPD2P0DJD1 1756 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 LIG1P18858 919 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 TEFQ10587 303 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 SASS6Q6UVJ0 657 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 CKAP2LQ8IYA6 745 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 SUCLG2Q96I99 432 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 KCNF1Q9H3M0 494 aa19.82■□□□□ 0.76
ZNF541-201ENST00000263351 SASH1O94885 1247 aa19.81■□□□□ 0.76
ZNF541-201ENST00000263351 KCNJ4P48050 445 aa19.81■□□□□ 0.76
ZNF541-201ENST00000263351 TTC6Q86TZ1 520 aa19.81■□□□□ 0.76
ZNF541-201ENST00000263351 CLASRPQ8N2M8 674 aaKnown RBP19.81■□□□□ 0.76
ZNF541-201ENST00000263351 NOLC1Q14978 699 aaKnown RBP eCLIP19.81■□□□□ 0.76
ZNF541-201ENST00000263351 TMEM87AQ8NBN3 555 aa19.81■□□□□ 0.76
ZNF541-201ENST00000263351 FUCA2Q9BTY2 467 aa19.81■□□□□ 0.76
ZNF541-201ENST00000263351 PXDNQ92626 1479 aa19.8■□□□□ 0.76
ZNF541-201ENST00000263351 CEMIPQ8WUJ3 1361 aa19.8■□□□□ 0.76
ZNF541-201ENST00000263351 IFIT2P09913 472 aaKnown RBP19.8■□□□□ 0.76
ZNF541-201ENST00000263351 FOSBP53539 338 aa19.8■□□□□ 0.76
ZNF541-201ENST00000263351 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
ZNF541-201ENST00000263351 ZNF589Q86UQ0 364 aaPredicted RBP19.8■□□□□ 0.76
ZNF541-201ENST00000263351 GLRX3O76003 335 aaKnown RBP19.8■□□□□ 0.76
ZNF541-201ENST00000263351 SLFNL1Q499Z3 407 aa19.8■□□□□ 0.76
ZNF541-201ENST00000263351 BICC1Q9H694 974 aaKnown RBP19.8■□□□□ 0.76
ZNF541-201ENST00000263351 ECHDC1Q9NTX5 307 aa19.8■□□□□ 0.76
ZNF541-201ENST00000263351 PHF14O94880 888 aa19.79■□□□□ 0.76
ZNF541-201ENST00000263351 SLC39A6Q13433 755 aa19.79■□□□□ 0.76
ZNF541-201ENST00000263351 CREB3L3Q68CJ9 461 aa19.79■□□□□ 0.76
ZNF541-201ENST00000263351 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.79■□□□□ 0.76
ZNF541-201ENST00000263351 ZNF710Q8N1W2 664 aa19.79■□□□□ 0.76
ZNF541-201ENST00000263351 DDX11Q96FC9 970 aa19.79■□□□□ 0.76
ZNF541-201ENST00000263351 PXDNLA1KZ92 1463 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 KDM4AO75164 1064 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 NECTIN1Q15223 517 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 A0A087WWV3 80 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 CSPP1Q1MSJ5 1256 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 LUZP1Q86V48 1076 aa19.78■□□□□ 0.76
ZNF541-201ENST00000263351 ZSWIM6Q9HCJ5 1215 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms