RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ANKRD45Q5TZF3 282 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 SMC5Q8IY18 1101 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
LDB3-201ENST00000263066 CTNNA3Q9UI47 895 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 SUFUQ9UMX1 484 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 LRPPRCP42704 1394 aaKnown RBP9.87□□□□□ -0.83
LDB3-201ENST00000263066 ELF2Q15723 593 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 KIF18AQ8NI77 898 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 NEBLO76041 1014 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 NCBP1Q09161 790 aaKnown RBP9.87□□□□□ -0.83
LDB3-201ENST00000263066 EIF4A2Q14240 407 aaKnown RBP9.87□□□□□ -0.83
LDB3-201ENST00000263066 PTPN14Q15678 1187 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 BRMS1Q9HCU9 246 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 ADGRB1O14514 1584 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 CXorf56Q9H5V9 222 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 SMTNL1A8MU46 457 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 CEP135Q66GS9 1140 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 BRINP3Q76B58 766 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 UBXN4Q92575 508 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 MRVI1Q9Y6F6 885 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 PTPRMP28827 1452 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 ADGRB3O60242 1522 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 PSEN1P49768 467 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 PDLIM2Q96JY6 352 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 EYA1Q99502 592 aa9.86□□□□□ -0.83
LDB3-201ENST00000263066 RBM28Q9NW13 759 aaKnown RBP9.86□□□□□ -0.83
LDB3-201ENST00000263066 SRRTQ9BXP5 876 aaKnown RBP9.85□□□□□ -0.83
LDB3-201ENST00000263066 TMEM63CQ9P1W3 806 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 ZNF219Q9P2Y4 722 aaPredicted RBP9.85□□□□□ -0.83
LDB3-201ENST00000263066 BTBD11A6QL63 1104 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 ANKRD65E5RJM6 399 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 HSP90B2PQ58FF3 399 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 LARP1Q6PKG0 1096 aaKnown RBP9.85□□□□□ -0.83
LDB3-201ENST00000263066 CENPHQ9H3R5 247 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 PAXBP1Q9Y5B6 917 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 TPM1P09493 284 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 TMPOP42166 694 aaKnown RBP9.85□□□□□ -0.83
LDB3-201ENST00000263066 CCDC34Q96HJ3 373 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 CHAMP1Q96JM3 812 aa9.85□□□□□ -0.83
LDB3-201ENST00000263066 RRP15Q9Y3B9 282 aaKnown RBP9.85□□□□□ -0.83
LDB3-201ENST00000263066 MAP2K1Q02750 393 aaPredicted RBP9.84□□□□□ -0.83
LDB3-201ENST00000263066 HDGFL1Q5TGJ6 251 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 USP21Q9UK80 565 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 TMEM131LA2VDJ0 1609 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 GUCY2CP25092 1073 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 RIC3Q7Z5B4 369 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 GOLGA6L19H0YKK7 550 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 PTGS1P23219 599 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 MCCP23508 829 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 HSPA1LP34931 641 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 SLC24A3Q9HC58 644 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 A2ML1A8K2U0 1454 aa9.84□□□□□ -0.83
LDB3-201ENST00000263066 ARHGEF28Q8N1W1 1705 aaKnown RBP9.83□□□□□ -0.84
LDB3-201ENST00000263066 PDE3AQ14432 1141 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 NBPF6Q5VWK0 638 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 CCDC186Q7Z3E2 898 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 TICAM2Q86XR7 235 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 NBPF4Q96M43 638 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 C9orf78Q9NZ63 289 aaPredicted RBP9.83□□□□□ -0.84
LDB3-201ENST00000263066 CPSF2Q9P2I0 782 aaKnown RBP9.83□□□□□ -0.84
LDB3-201ENST00000263066 DDB1Q16531 1140 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 LMBRD1Q9NUN5 540 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 FIBPO43427 364 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 DUSP27Q5VZP5 1158 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 FILIP1Q7Z7B0 1213 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 NFATC2IPQ8NCF5 419 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 KIF1BO60333 1816 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 CFAP74Q9C0B2 1584 aa9.83□□□□□ -0.84
LDB3-201ENST00000263066 PER1O15534 1290 aaPredicted RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 MMP14P50281 582 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 BRPF1P55201 1214 aaPredicted RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 DHX8Q14562 1220 aaKnown RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 GBP6Q6ZN66 633 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 PRPF38AQ8NAV1 312 aaKnown RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 F6X3S4 739 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 CLSTN1O94985 981 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 TWISTNBQ3B726 338 aaPredicted RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 CARD10Q9BWT7 1032 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 ZNF215Q9UL58 517 aaPredicted RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 CREBRFQ8IUR6 639 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 EGFL6Q8IUX8 553 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 CCDC24Q8N4L8 307 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 ABCC11Q96J66 1382 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 GPTP24298 496 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 HOXC9P31274 260 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 SEMA3FQ13275 785 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 PSMD1Q99460 953 aa9.82□□□□□ -0.84
LDB3-201ENST00000263066 PAIP2Q9BPZ3 127 aaKnown RBP9.82□□□□□ -0.84
LDB3-201ENST00000263066 PCDHB15Q9Y5E8 787 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms