RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
SIM1-201ENST00000262901 VAMP4O75379 141 aa11.51□□□□□ -0.57
SIM1-201ENST00000262901 CAVIN1Q6NZI2 390 aaKnown RBP11.51□□□□□ -0.57
SIM1-201ENST00000262901 NPHP1O15259 732 aa11.51□□□□□ -0.57
SIM1-201ENST00000262901 ZNF853P0CG23 659 aa11.51□□□□□ -0.57
SIM1-201ENST00000262901 SLC39A6Q13433 755 aa11.51□□□□□ -0.57
SIM1-201ENST00000262901 FAM13BQ9NYF5 915 aa11.51□□□□□ -0.57
SIM1-201ENST00000262901 XIRP1Q702N8 1843 aaKnown RBP11.5□□□□□ -0.57
SIM1-201ENST00000262901 AFF2P51816 1311 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 CLSTN1O94985 981 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 NEK4P51957 841 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 ALS2Q96Q42 1657 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 IRF6O14896 467 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 CYP27B1O15528 508 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 MRE11P49959 708 aa11.5□□□□□ -0.57
SIM1-201ENST00000262901 VPS37CA5D8V6 355 aaPredicted RBP11.5□□□□□ -0.57
SIM1-201ENST00000262901 SNRPA1P09661 255 aaKnown RBP11.49□□□□□ -0.57
SIM1-201ENST00000262901 LTN1O94822 1766 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 NUCB2P80303 420 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 VPS72Q15906 364 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 KRT24Q2M2I5 525 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 ZNF790Q6PG37 636 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
SIM1-201ENST00000262901 ABCC6O95255 1503 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 MCM4P33991 863 aa11.49□□□□□ -0.57
SIM1-201ENST00000262901 NASPP49321 788 aaPredicted RBP11.49□□□□□ -0.57
SIM1-201ENST00000262901 SPATA31A1Q5TZJ5 1347 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 HOXB7P09629 217 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 NEXNQ0ZGT2 675 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
SIM1-201ENST00000262901 CAMTA1Q9Y6Y1 1673 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 ZNF772Q68DY9 489 aaPredicted RBP11.48□□□□□ -0.57
SIM1-201ENST00000262901 PRPF40AO75400 957 aaKnown RBP11.48□□□□□ -0.57
SIM1-201ENST00000262901 PHF14O94880 888 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 STARD3NLO95772 234 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 AIMP1Q12904 312 aaKnown RBP11.48□□□□□ -0.57
SIM1-201ENST00000262901 CHD1LQ86WJ1 897 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 ACSBG1Q96GR2 724 aa11.48□□□□□ -0.57
SIM1-201ENST00000262901 TEX13AQ9BXU3 409 aaPredicted RBP11.48□□□□□ -0.57
SIM1-201ENST00000262901 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
SIM1-201ENST00000262901 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
SIM1-201ENST00000262901 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
SIM1-201ENST00000262901 EIF4A1P60842 406 aaKnown RBP11.47□□□□□ -0.57
SIM1-201ENST00000262901 PLEKHG2Q9H7P9 1386 aa11.47□□□□□ -0.57
SIM1-201ENST00000262901 KAT6BQ8WYB5 2073 aa11.46□□□□□ -0.57
SIM1-201ENST00000262901 SURF6O75683 361 aaKnown RBP11.46□□□□□ -0.57
SIM1-201ENST00000262901 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.57
SIM1-201ENST00000262901 OVOS2A0A0G2JMS6 1433 aa11.46□□□□□ -0.57
SIM1-201ENST00000262901 MEGF6O75095 1541 aa11.46□□□□□ -0.57
SIM1-201ENST00000262901 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.57
SIM1-201ENST00000262901 MRPL50Q8N5N7 158 aaKnown RBP11.46□□□□□ -0.57
SIM1-201ENST00000262901 CGNQ9P2M7 1197 aaKnown RBP11.46□□□□□ -0.57
SIM1-201ENST00000262901 TNNQ9UQP3 1299 aa11.46□□□□□ -0.57
SIM1-201ENST00000262901 PTPRCP08575 1304 aa11.46□□□□□ -0.57
SIM1-201ENST00000262901 MYL6BP14649 208 aa11.46□□□□□ -0.58
SIM1-201ENST00000262901 FOSBP53539 338 aa11.46□□□□□ -0.58
SIM1-201ENST00000262901 BARGINQ6ZT62 677 aa11.46□□□□□ -0.58
SIM1-201ENST00000262901 ARHGAP45Q92619 1136 aa11.46□□□□□ -0.58
SIM1-201ENST00000262901 HYPKQ9NX55 129 aa11.46□□□□□ -0.58
SIM1-201ENST00000262901 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.58
SIM1-201ENST00000262901 H3BQV1 296 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 PRIM1P49642 420 aaKnown RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 PHRF1Q9P1Y6 1649 aaKnown RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 GCC1Q96CN9 775 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 TRIM27P14373 513 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
SIM1-201ENST00000262901 FLIIQ13045 1269 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 FAM184AQ8NB25 1140 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 USP54Q70EL1 1684 aa11.45□□□□□ -0.58
SIM1-201ENST00000262901 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
SIM1-201ENST00000262901 KCNQ3O43525 872 aa11.44□□□□□ -0.58
SIM1-201ENST00000262901 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
SIM1-201ENST00000262901 SMC3Q9UQE7 1217 aa11.44□□□□□ -0.58
SIM1-201ENST00000262901 KIF20AO95235 890 aa11.44□□□□□ -0.58
SIM1-201ENST00000262901 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
SIM1-201ENST00000262901 PCDHB15Q9Y5E8 787 aa11.44□□□□□ -0.58
SIM1-201ENST00000262901 ATP6V1DQ9Y5K8 247 aa11.44□□□□□ -0.58
SIM1-201ENST00000262901 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
SIM1-201ENST00000262901 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
SIM1-201ENST00000262901 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
SIM1-201ENST00000262901 CEMIPQ8WUJ3 1361 aa11.43□□□□□ -0.58
SIM1-201ENST00000262901 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
SIM1-201ENST00000262901 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
SIM1-201ENST00000262901 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
SIM1-201ENST00000262901 KIF6Q6ZMV9 814 aa11.43□□□□□ -0.58
SIM1-201ENST00000262901 K7ELQ4 463 aaPredicted RBP11.43□□□□□ -0.58
SIM1-201ENST00000262901 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms