RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TBC1D2BQ9UPU7 963 aa34.89■■■■□ 3.18
SMARCD3-201ENST00000262188 ABCC4O15439 1325 aa34.89■■■■□ 3.18
SMARCD3-201ENST00000262188 NEFLP07196 543 aa34.89■■■■□ 3.18
SMARCD3-201ENST00000262188 PDE3AQ14432 1141 aa34.87■■■■□ 3.17
SMARCD3-201ENST00000262188 EXOC6Q8TAG9 804 aa34.87■■■■□ 3.17
SMARCD3-201ENST00000262188 UBE2Q2Q8WVN8 375 aa34.87■■■■□ 3.17
SMARCD3-201ENST00000262188 ANKRD13DQ6ZTN6 518 aa34.87■■■■□ 3.17
SMARCD3-201ENST00000262188 RIC3Q7Z5B4 369 aa34.87■■■■□ 3.17
SMARCD3-201ENST00000262188 BAG6P46379 1132 aa34.86■■■■□ 3.17
SMARCD3-201ENST00000262188 RC3H1Q5TC82 1133 aaKnown RBP34.86■■■■□ 3.17
SMARCD3-201ENST00000262188 KSR2Q6VAB6 950 aa34.86■■■■□ 3.17
SMARCD3-201ENST00000262188 AK7Q96M32 723 aa34.86■■■■□ 3.17
SMARCD3-201ENST00000262188 PHF14O94880 888 aa34.85■■■■□ 3.17
SMARCD3-201ENST00000262188 ZNF827Q17R98 1081 aa34.85■■■■□ 3.17
SMARCD3-201ENST00000262188 ITPRIPQ8IWB1 547 aa34.85■■■■□ 3.17
SMARCD3-201ENST00000262188 DNAAF4Q8WXU2 420 aa34.84■■■■□ 3.17
SMARCD3-201ENST00000262188 COL15A1P39059 1388 aa34.84■■■■□ 3.17
SMARCD3-201ENST00000262188 DDX58O95786 925 aaKnown RBP34.83■■■■□ 3.17
SMARCD3-201ENST00000262188 DZIP3Q86Y13 1208 aaKnown RBP34.83■■■■□ 3.17
SMARCD3-201ENST00000262188 RGPD3A6NKT7 1758 aaPredicted RBP34.83■■■■□ 3.17
SMARCD3-201ENST00000262188 RGPD4Q7Z3J3 1758 aa34.83■■■■□ 3.17
SMARCD3-201ENST00000262188 RPS6KA4O75676 772 aa34.83■■■■□ 3.17
SMARCD3-201ENST00000262188 NPM2Q86SE8 214 aaKnown RBP34.82■■■■□ 3.16
SMARCD3-201ENST00000262188 HLFQ16534 295 aa34.81■■■■□ 3.16
SMARCD3-201ENST00000262188 PLBD2Q8NHP8 589 aa34.81■■■■□ 3.16
SMARCD3-201ENST00000262188 RTCBQ9Y3I0 505 aaKnown RBP34.81■■■■□ 3.16
SMARCD3-201ENST00000262188 ARFGEF2Q9Y6D5 1785 aa34.81■■■■□ 3.16
SMARCD3-201ENST00000262188 KIF6Q6ZMV9 814 aa34.8■■■■□ 3.16
SMARCD3-201ENST00000262188 UPF1Q92900 1129 aaKnown RBP eCLIP34.8■■■■□ 3.16
SMARCD3-201ENST00000262188 MVPQ14764 893 aaKnown RBP34.79■■■■□ 3.16
SMARCD3-201ENST00000262188 MYD88Q99836 296 aa34.79■■■■□ 3.16
SMARCD3-201ENST00000262188 NUP188Q5SRE5 1749 aa34.79■■■■□ 3.16
SMARCD3-201ENST00000262188 CWF19L2Q2TBE0 894 aaKnown RBP34.78■■■■□ 3.16
SMARCD3-201ENST00000262188 ANO8Q9HCE9 1232 aaPredicted RBP34.78■■■■□ 3.16
SMARCD3-201ENST00000262188 MS4A1P11836 297 aa34.78■■■■□ 3.16
SMARCD3-201ENST00000262188 MAP3K15Q6ZN16 1313 aa34.78■■■■□ 3.16
SMARCD3-201ENST00000262188 ATP5J2-PTCD1G3V325 749 aa34.77■■■■□ 3.16
SMARCD3-201ENST00000262188 BEND3Q5T5X7 828 aa34.77■■■■□ 3.16
SMARCD3-201ENST00000262188 SRP68Q9UHB9 627 aaKnown RBP34.77■■■■□ 3.16
SMARCD3-201ENST00000262188 UBR3Q6ZT12 1888 aa34.77■■■■□ 3.16
SMARCD3-201ENST00000262188 INTS3Q68E01 1043 aaKnown RBP34.76■■■■□ 3.16
SMARCD3-201ENST00000262188 AKT1S1Q96B36 256 aa34.76■■■■□ 3.16
SMARCD3-201ENST00000262188 ARHGEF1Q92888 912 aaKnown RBP34.76■■■■□ 3.15
SMARCD3-201ENST00000262188 METTL22Q9BUU2 404 aaPredicted RBP34.76■■■■□ 3.15
SMARCD3-201ENST00000262188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.75■■■■□ 3.15
SMARCD3-201ENST00000262188 CAMTA2O94983 1202 aa34.74■■■■□ 3.15
SMARCD3-201ENST00000262188 IGKV5-2P06315 115 aa34.74■■■■□ 3.15
SMARCD3-201ENST00000262188 CCDC125Q86Z20 511 aa34.74■■■■□ 3.15
SMARCD3-201ENST00000262188 TFCP2L1Q9NZI6 479 aa34.74■■■■□ 3.15
SMARCD3-201ENST00000262188 MSH5O43196 834 aa34.73■■■■□ 3.15
SMARCD3-201ENST00000262188 CCT4P50991 539 aaKnown RBP34.72■■■■□ 3.15
SMARCD3-201ENST00000262188 SRCIN1Q9C0H9 1055 aa34.72■■■■□ 3.15
SMARCD3-201ENST00000262188 PXDNLA1KZ92 1463 aa34.72■■■■□ 3.15
SMARCD3-201ENST00000262188 TRAPPC3LQ5T215 181 aa34.71■■■■□ 3.15
SMARCD3-201ENST00000262188 TUBGCP6Q96RT7 1819 aa34.71■■■■□ 3.15
SMARCD3-201ENST00000262188 C4AP0C0L4 1744 aa34.7■■■■□ 3.15
SMARCD3-201ENST00000262188 USPL1Q5W0Q7 1092 aa34.7■■■■□ 3.15
SMARCD3-201ENST00000262188 GPTP24298 496 aa34.69■■■■□ 3.14
SMARCD3-201ENST00000262188 GIGYF2Q6Y7W6 1299 aaKnown RBP34.69■■■■□ 3.14
SMARCD3-201ENST00000262188 MEIS3Q99687 375 aa34.69■■■■□ 3.14
SMARCD3-201ENST00000262188 A0A087WZG4 1122 aa34.68■■■■□ 3.14
SMARCD3-201ENST00000262188 NEXNQ0ZGT2 675 aa34.68■■■■□ 3.14
SMARCD3-201ENST00000262188 BCL2L12Q9HB09 334 aa34.68■■■■□ 3.14
SMARCD3-201ENST00000262188 ATP10DQ9P241 1426 aa34.68■■■■□ 3.14
SMARCD3-201ENST00000262188 NUP98P52948 1817 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 ZBTB7BO15156 539 aaPredicted RBP34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 RFC4P35249 363 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 LINS1Q8NG48 757 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 JARID2Q92833 1246 aaPredicted RBP34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 DDX19BQ9UMR2 479 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 N4BP2Q86UW6 1770 aaPredicted RBP34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 NEURL1BA8MQ27 555 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 ERVV-1B6SEH8 477 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 DEKP35659 375 aaKnown RBP34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 TCIRG1Q13488 830 aa34.67■■■■□ 3.14
SMARCD3-201ENST00000262188 C1orf115Q9H7X2 142 aa34.66■■■■□ 3.14
SMARCD3-201ENST00000262188 NARFQ9UHQ1 456 aa34.66■■■■□ 3.14
SMARCD3-201ENST00000262188 SSFA2P28290 1259 aa34.65■■■■□ 3.14
SMARCD3-201ENST00000262188 BCORQ6W2J9 1755 aa34.65■■■■□ 3.14
SMARCD3-201ENST00000262188 ZPR1O75312 459 aa34.64■■■■□ 3.14
SMARCD3-201ENST00000262188 AFDNP55196 1824 aaKnown RBP34.64■■■■□ 3.14
SMARCD3-201ENST00000262188 SLC15A2Q16348 729 aa34.63■■■■□ 3.14
SMARCD3-201ENST00000262188 COL23A1Q86Y22 540 aaPredicted RBP34.63■■■■□ 3.14
SMARCD3-201ENST00000262188 USP44Q9H0E7 712 aa34.63■■■■□ 3.14
SMARCD3-201ENST00000262188 USP42Q9H9J4 1324 aaKnown RBP34.63■■■■□ 3.13
SMARCD3-201ENST00000262188 PNPLA7Q6ZV29 1317 aa34.63■■■■□ 3.13
SMARCD3-201ENST00000262188 RTL5Q5HYW3 569 aaPredicted RBP34.62■■■■□ 3.13
SMARCD3-201ENST00000262188 ISCA1Q9BUE6 129 aa34.62■■■■□ 3.13
SMARCD3-201ENST00000262188 STK32BQ9NY57 414 aa34.62■■■■□ 3.13
SMARCD3-201ENST00000262188 SCN7AQ01118 1682 aa34.62■■■■□ 3.13
SMARCD3-201ENST00000262188 NBPF7P0C2Y1 421 aaPredicted RBP34.62■■■■□ 3.13
SMARCD3-201ENST00000262188 BICDL1Q6ZP65 573 aa34.62■■■■□ 3.13
SMARCD3-201ENST00000262188 ADRA2BP18089 450 aa34.61■■■■□ 3.13
SMARCD3-201ENST00000262188 UBN2Q6ZU65 1347 aa34.61■■■■□ 3.13
SMARCD3-201ENST00000262188 ALDH1L1O75891 902 aa34.6■■■■□ 3.13
SMARCD3-201ENST00000262188 GCKRQ14397 625 aa34.6■■■■□ 3.13
SMARCD3-201ENST00000262188 ZBTB40Q9NUA8 1239 aa34.6■■■■□ 3.13
SMARCD3-201ENST00000262188 FAM177BA6PVY3 158 aa34.6■■■■□ 3.13
SMARCD3-201ENST00000262188 TBC1D9BQ66K14 1250 aa34.59■■■■□ 3.13
SMARCD3-201ENST00000262188 ANKRD36CQ5JPF3 1778 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms