RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 RASSF4Q9H2L5 321 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 VPS18Q9P253 973 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 PHACTR2O75167 634 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 SLU7O95391 586 aaKnown RBP11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 KIF6Q6ZMV9 814 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 MAATS1Q7Z4T9 603 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 SNX21Q969T3 373 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 KRBA2Q6ZNG9 492 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 ZGPATQ8N5A5 531 aaKnown RBP11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 MEIS3Q99687 375 aa11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
CTDSPL2-201ENST00000260327 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 CTAGE5O15320 804 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 CABP4P57796 275 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 CEP57Q86XR8 500 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 RALGAPBQ86X10 1494 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 CUL7Q14999 1698 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 FLIIQ13045 1269 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 SLC3A2P08195 630 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC175P0C221 793 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 RBSNQ9H1K0 784 aa11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 NOL7Q9UMY1 257 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
CTDSPL2-201ENST00000260327 TSC1Q92574 1164 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 DNAJC25Q9H1X3 360 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 CDKL5O76039 1030 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 SPECC1Q5M775 1068 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 CCDC150Q8NCX0 1101 aa11.27□□□□□ -0.6
CTDSPL2-201ENST00000260327 IDH1O75874 414 aaKnown RBP11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 ZSCAN22P10073 491 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 ATF3P18847 181 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 HS1BP3Q53T59 392 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 PTPRCP08575 1304 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 ASXL1Q8IXJ9 1541 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 UBE4AQ14139 1066 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 IFT140Q96RY7 1462 aa11.27□□□□□ -0.61
CTDSPL2-201ENST00000260327 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 FAM135AQ9P2D6 1515 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 KIF20AO95235 890 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 FEZ1Q99689 392 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 TDO2P48775 406 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 JADE2Q9NQC1 790 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 KIF14Q15058 1648 aa11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 RIOK3O14730 519 aaKnown RBP11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-201ENST00000260327 NOS1P29475 1434 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 MYD88Q99836 296 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 PDE1AP54750 535 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 STRN4Q9NRL3 753 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 EZRP15311 586 aaKnown RBP11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 C8orf58Q8NAV2 365 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 YEATS4O95619 227 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 POLR3DP05423 398 aaPredicted RBP11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 HSPA4P34932 840 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 DNAJC21Q5F1R6 531 aaKnown RBP11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 RAB11FIP4Q86YS3 637 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
CTDSPL2-201ENST00000260327 DNM1Q05193 864 aaKnown RBP11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 ATRIPQ8WXE1 791 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 KDM2BQ8NHM5 1336 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 IL16Q14005 1332 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 AOPEPQ8N6M6 819 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 DACT1Q9NYF0 836 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 GOLGA6L9A6NEM1 432 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 HSF2BPO75031 334 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 TESK2Q96S53 571 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 ECHDC1Q9NTX5 307 aa11.24□□□□□ -0.61
CTDSPL2-201ENST00000260327 UBASH3AP57075 661 aa11.23□□□□□ -0.61
CTDSPL2-201ENST00000260327 ZSCAN25Q6NSZ9 544 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms