RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
CCDC90B-201ENST00000260054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 DDX58O95786 925 aaKnown RBP20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 SSFA2P28290 1259 aa20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 KSR2Q6VAB6 950 aa20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 PLBD2Q8NHP8 589 aa20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
CCDC90B-201ENST00000260054 SLC15A2Q16348 729 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 TRAPPC3LQ5T215 181 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 C20orf194Q5TEA3 1177 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 MAP3K2Q9Y2U5 619 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 TUBGCP6Q96RT7 1819 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 MAP3K15Q6ZN16 1313 aa20.11■□□□□ 0.81
CCDC90B-201ENST00000260054 A0A087WZG4 1122 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 ADRA2BP18089 450 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 ABCC4O15439 1325 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 RLBP1P12271 317 aa20.1■□□□□ 0.81
CCDC90B-201ENST00000260054 DZIP1LQ8IYY4 767 aaKnown RBP20.09■□□□□ 0.81
CCDC90B-201ENST00000260054 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
CCDC90B-201ENST00000260054 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
CCDC90B-201ENST00000260054 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
CCDC90B-201ENST00000260054 HLFQ16534 295 aa20.08■□□□□ 0.81
CCDC90B-201ENST00000260054 PANK1Q8TE04 598 aa20.08■□□□□ 0.81
CCDC90B-201ENST00000260054 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
CCDC90B-201ENST00000260054 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
CCDC90B-201ENST00000260054 ARFGEF2Q9Y6D5 1785 aa20.08■□□□□ 0.8
CCDC90B-201ENST00000260054 ERVV-1B6SEH8 477 aa20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 RFC4P35249 363 aa20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 SLC4A10Q6U841 1118 aa20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 USP42Q9H9J4 1324 aaKnown RBP20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 METTL22Q9BUU2 404 aaPredicted RBP20.07■□□□□ 0.8
CCDC90B-201ENST00000260054 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
CCDC90B-201ENST00000260054 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
CCDC90B-201ENST00000260054 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
CCDC90B-201ENST00000260054 PXDNLA1KZ92 1463 aa20.06■□□□□ 0.8
CCDC90B-201ENST00000260054 SCN7AQ01118 1682 aa20.05■□□□□ 0.8
CCDC90B-201ENST00000260054 ZPR1O75312 459 aa20.05■□□□□ 0.8
CCDC90B-201ENST00000260054 BEND3Q5T5X7 828 aa20.05■□□□□ 0.8
CCDC90B-201ENST00000260054 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
CCDC90B-201ENST00000260054 MYD88Q99836 296 aa20.05■□□□□ 0.8
CCDC90B-201ENST00000260054 BCL2L12Q9HB09 334 aa20.05■□□□□ 0.8
CCDC90B-201ENST00000260054 MS4A1P11836 297 aa20.04■□□□□ 0.8
CCDC90B-201ENST00000260054 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
CCDC90B-201ENST00000260054 QSER1Q2KHR3 1735 aa20.04■□□□□ 0.8
CCDC90B-201ENST00000260054 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
CCDC90B-201ENST00000260054 TCIRG1Q13488 830 aa20.03■□□□□ 0.8
CCDC90B-201ENST00000260054 INTS3Q68E01 1043 aaKnown RBP20.03■□□□□ 0.8
CCDC90B-201ENST00000260054 NUP98P52948 1817 aa20.03■□□□□ 0.8
CCDC90B-201ENST00000260054 IGKV5-2P06315 115 aa20.03■□□□□ 0.8
CCDC90B-201ENST00000260054 ATP5J2-PTCD1G3V325 749 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 RGL2O15211 777 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 MSH5O43196 834 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 GYS1P13807 737 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 NEXNQ0ZGT2 675 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 CLEC4GQ6UXB4 293 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 LINS1Q8NG48 757 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 COG6Q9Y2V7 657 aa20.02■□□□□ 0.8
CCDC90B-201ENST00000260054 CCT4P50991 539 aaKnown RBP20.01■□□□□ 0.79
CCDC90B-201ENST00000260054 SRCIN1Q9C0H9 1055 aa20.01■□□□□ 0.79
CCDC90B-201ENST00000260054 ZNF652Q9Y2D9 606 aa20.01■□□□□ 0.79
CCDC90B-201ENST00000260054 HSP90AB3PQ58FF7 597 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 ITPRIPQ8IWB1 547 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 PDGFDQ9GZP0 370 aaPredicted RBP20■□□□□ 0.79
CCDC90B-201ENST00000260054 N4BP2Q86UW6 1770 aaPredicted RBP20■□□□□ 0.79
CCDC90B-201ENST00000260054 NEURL1BA8MQ27 555 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 GPTP24298 496 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 FKBP8Q14318 412 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 MVPQ14764 893 aaKnown RBP20■□□□□ 0.79
CCDC90B-201ENST00000260054 ZNF34Q8IZ26 560 aa20■□□□□ 0.79
CCDC90B-201ENST00000260054 ANKRD36CQ5JPF3 1778 aa19.99■□□□□ 0.79
CCDC90B-201ENST00000260054 UBN2Q6ZU65 1347 aa19.99■□□□□ 0.79
CCDC90B-201ENST00000260054 TBC1D9BQ66K14 1250 aa19.99■□□□□ 0.79
CCDC90B-201ENST00000260054 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
CCDC90B-201ENST00000260054 ALDH1L1O75891 902 aa19.98■□□□□ 0.79
CCDC90B-201ENST00000260054 TRIM28Q13263 835 aaKnown RBP19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 R3HDM1Q15032 1099 aaKnown RBP19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 BICDL1Q6ZP65 573 aa19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 GCKRQ14397 625 aa19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 NLRP10Q86W26 655 aa19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 CCDC191Q8NCU4 936 aa19.97■□□□□ 0.79
CCDC90B-201ENST00000260054 AFDNP55196 1824 aaKnown RBP19.95■□□□□ 0.78
CCDC90B-201ENST00000260054 NFIXQ14938 502 aa19.95■□□□□ 0.78
CCDC90B-201ENST00000260054 USP44Q9H0E7 712 aa19.95■□□□□ 0.78
CCDC90B-201ENST00000260054 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
CCDC90B-201ENST00000260054 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
CCDC90B-201ENST00000260054 IBTKQ9P2D0 1353 aaPredicted RBP19.95■□□□□ 0.78
CCDC90B-201ENST00000260054 ZBTB7BO15156 539 aaPredicted RBP19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 SUSD4Q5VX71 490 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms