RNA–Protein interactions for RNA: ENST00000259607.6

CCL21-201, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCL21, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-201ENST00000259607 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 MAP3K15Q6ZN16 1313 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 C10orf71Q711Q0 1435 aa13.29□□□□□ -0.28
CCL21-201ENST00000259607 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
CCL21-201ENST00000259607 PDE6BP35913 854 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 DDR1Q08345 913 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 TBC1D9BQ66K14 1250 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.29
CCL21-201ENST00000259607 CNBD1Q8NA66 436 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
CCL21-201ENST00000259607 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCL21-201ENST00000259607 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
CCL21-201ENST00000259607 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
CCL21-201ENST00000259607 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
CCL21-201ENST00000259607 PARP10Q53GL7 1025 aa13.26□□□□□ -0.29
CCL21-201ENST00000259607 POTEHQ6S545 545 aa13.26□□□□□ -0.29
CCL21-201ENST00000259607 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
CCL21-201ENST00000259607 NLGN2Q8NFZ4 835 aa13.26□□□□□ -0.29
CCL21-201ENST00000259607 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
CCL21-201ENST00000259607 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 H0YIN7 160 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
CCL21-201ENST00000259607 PPP1R42Q7Z4L9 355 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 PIM2Q9P1W9 311 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 SALL2Q9Y467 1007 aaPredicted RBP13.25□□□□□ -0.29
CCL21-201ENST00000259607 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
CCL21-201ENST00000259607 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
CCL21-201ENST00000259607 PDIA6Q15084 440 aa13.24□□□□□ -0.29
CCL21-201ENST00000259607 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
CCL21-201ENST00000259607 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
CCL21-201ENST00000259607 CHPF2Q9P2E5 772 aa13.24□□□□□ -0.29
CCL21-201ENST00000259607 E9PSI1 815 aa13.23□□□□□ -0.29
CCL21-201ENST00000259607 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
CCL21-201ENST00000259607 DALRD3Q5D0E6 543 aaKnown RBP13.23□□□□□ -0.29
CCL21-201ENST00000259607 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
CCL21-201ENST00000259607 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
CCL21-201ENST00000259607 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
CCL21-201ENST00000259607 ZBTB3Q9H5J0 574 aa13.23□□□□□ -0.29
CCL21-201ENST00000259607 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
CCL21-201ENST00000259607 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
CCL21-201ENST00000259607 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
CCL21-201ENST00000259607 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
CCL21-201ENST00000259607 DPEP1P16444 411 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 HLFQ16534 295 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 PRR5LQ6MZQ0 368 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 C2CD5Q86YS7 1000 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
CCL21-201ENST00000259607 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 MIER1Q8N108 512 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 UTP14AQ9BVJ6 771 aaKnown RBP13.2□□□□□ -0.3
CCL21-201ENST00000259607 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
CCL21-201ENST00000259607 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
CCL21-201ENST00000259607 STYK1Q6J9G0 422 aa13.19□□□□□ -0.3
CCL21-201ENST00000259607 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
CCL21-201ENST00000259607 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
CCL21-201ENST00000259607 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
CCL21-201ENST00000259607 ANXA1P04083 346 aa13.18□□□□□ -0.3
CCL21-201ENST00000259607 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
CCL21-201ENST00000259607 NEXNQ0ZGT2 675 aa13.18□□□□□ -0.3
CCL21-201ENST00000259607 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
CCL21-201ENST00000259607 RIC1Q4ADV7 1423 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
CCL21-201ENST00000259607 NPR1P16066 1061 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 GPTP24298 496 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 YY1P25490 414 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
CCL21-201ENST00000259607 TRIM28Q13263 835 aaKnown RBP13.17□□□□□ -0.3
CCL21-201ENST00000259607 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCL21-201ENST00000259607 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
CCL21-201ENST00000259607 NUP98P52948 1817 aa13.17□□□□□ -0.3
CCL21-201ENST00000259607 SENP3-EIF4A1A0A087X0R7 540 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 FAM177BA6PVY3 158 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 VAMP4O75379 141 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 SRGNP10124 158 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 YBX3P16989 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCL21-201ENST00000259607 KCNA3P22001 575 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 CHRNA5P30532 468 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
CCL21-201ENST00000259607 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
CCL21-201ENST00000259607 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms