RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 DDX19AQ9NUU7 478 aaKnown RBP13.65□□□□□ -0.22
TROAP-201ENST00000257909 NEMFO60524 1076 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
TROAP-201ENST00000257909 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
TROAP-201ENST00000257909 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 LARGE1O95461 756 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 NRBP1Q9UHY1 535 aa13.64□□□□□ -0.23
TROAP-201ENST00000257909 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
TROAP-201ENST00000257909 PDCP20941 246 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 CAMK4Q16566 473 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
TROAP-201ENST00000257909 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
TROAP-201ENST00000257909 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 LIG1P18858 919 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 FLIIQ13045 1269 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 RUFY2Q8WXA3 655 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 FAM53CQ9NYF3 392 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 CYP46A1Q9Y6A2 500 aa13.63□□□□□ -0.23
TROAP-201ENST00000257909 N4BP2Q86UW6 1770 aaPredicted RBP13.63□□□□□ -0.23
TROAP-201ENST00000257909 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
TROAP-201ENST00000257909 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 LARP1BQ659C4 914 aaKnown RBP13.62□□□□□ -0.23
TROAP-201ENST00000257909 CACTINQ8WUQ7 758 aaKnown RBP13.62□□□□□ -0.23
TROAP-201ENST00000257909 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 NAA30Q147X3 362 aaPredicted RBP13.62□□□□□ -0.23
TROAP-201ENST00000257909 CCDC30Q5VVM6 783 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
TROAP-201ENST00000257909 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 UBTFL1P0CB47 393 aaPredicted RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 ZNF165P49910 485 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 CKAP2LQ8IYA6 745 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 JAKMIP1Q96N16 626 aaKnown RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 CLSTN2Q9H4D0 955 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 PTPN14Q15678 1187 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 KMT5BQ4FZB7 885 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 RNF20Q5VTR2 975 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 CWC27Q6UX04 472 aaKnown RBP13.61□□□□□ -0.23
TROAP-201ENST00000257909 LRRC8AQ8IWT6 810 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 ZNF592Q92610 1267 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 KIF1BPQ96EK5 621 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
TROAP-201ENST00000257909 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 CPA1P15085 419 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 KCNB2Q92953 911 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 CALCOCO1Q9P1Z2 691 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
TROAP-201ENST00000257909 ME3Q16798 604 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 NYAP1Q6ZVC0 841 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 IPO4Q8TEX9 1081 aaKnown RBP13.6□□□□□ -0.23
TROAP-201ENST00000257909 SPATA32Q96LK8 384 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 MAP3K5Q99683 1374 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
TROAP-201ENST00000257909 RIMS1Q86UR5 1692 aaKnown RBP13.6□□□□□ -0.23
TROAP-201ENST00000257909 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
TROAP-201ENST00000257909 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 ZNF215Q9UL58 517 aaPredicted RBP13.59□□□□□ -0.23
TROAP-201ENST00000257909 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 KIF2AO00139 706 aaPredicted RBP13.59□□□□□ -0.23
TROAP-201ENST00000257909 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
TROAP-201ENST00000257909 KCNJ4P48050 445 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 ST3GAL1Q11201 340 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 POLA2Q14181 598 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 CDC37L1Q7L3B6 337 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 MRFAP1L1Q96HT8 127 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 TTC41PQ6P2S7 1318 aa13.59□□□□□ -0.23
TROAP-201ENST00000257909 GOLGA6L19H0YKK7 550 aa13.58□□□□□ -0.23
TROAP-201ENST00000257909 CCDC144BQ3MJ40 725 aa13.58□□□□□ -0.23
TROAP-201ENST00000257909 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.23
TROAP-201ENST00000257909 NUDT16Q96DE0 195 aaKnown RBP13.58□□□□□ -0.23
TROAP-201ENST00000257909 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
TROAP-201ENST00000257909 METP08581 1390 aa13.58□□□□□ -0.24
TROAP-201ENST00000257909 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
TROAP-201ENST00000257909 SLC20A2Q08357 652 aa13.58□□□□□ -0.24
TROAP-201ENST00000257909 ADCK5Q3MIX3 580 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms