RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.31□□□□□ -0.12
CCNA1-201ENST00000255465 PARD3Q8TEW0 1356 aa14.31□□□□□ -0.12
CCNA1-201ENST00000255465 PLIN1O60240 522 aa14.31□□□□□ -0.12
CCNA1-201ENST00000255465 SEC24BO95487 1268 aa14.31□□□□□ -0.12
CCNA1-201ENST00000255465 NOP2P46087 812 aaKnown RBP14.31□□□□□ -0.12
CCNA1-201ENST00000255465 FKBP5Q13451 457 aaPredicted RBP14.31□□□□□ -0.12
CCNA1-201ENST00000255465 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
CCNA1-201ENST00000255465 IL13P35225 146 aa14.3□□□□□ -0.12
CCNA1-201ENST00000255465 RAPGEF4Q8WZA2 1011 aa14.3□□□□□ -0.12
CCNA1-201ENST00000255465 RAI14Q9P0K7 980 aa14.3□□□□□ -0.12
CCNA1-201ENST00000255465 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
CCNA1-201ENST00000255465 CCDC172P0C7W6 258 aa14.29□□□□□ -0.12
CCNA1-201ENST00000255465 ICE2Q659A1 982 aa14.29□□□□□ -0.12
CCNA1-201ENST00000255465 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
CCNA1-201ENST00000255465 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
CCNA1-201ENST00000255465 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
CCNA1-201ENST00000255465 OVOS2A0A0G2JMS6 1433 aa14.29□□□□□ -0.12
CCNA1-201ENST00000255465 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
CCNA1-201ENST00000255465 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
CCNA1-201ENST00000255465 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
CCNA1-201ENST00000255465 MNS1Q8NEH6 495 aa14.29□□□□□ -0.12
CCNA1-201ENST00000255465 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCNA1-201ENST00000255465 KRT222Q8N1A0 295 aa14.28□□□□□ -0.12
CCNA1-201ENST00000255465 CTNNA3Q9UI47 895 aa14.28□□□□□ -0.12
CCNA1-201ENST00000255465 DIAPH1O60610 1272 aaKnown RBP14.27□□□□□ -0.12
CCNA1-201ENST00000255465 GUCY2CP25092 1073 aa14.27□□□□□ -0.12
CCNA1-201ENST00000255465 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.12
CCNA1-201ENST00000255465 RASSF4Q9H2L5 321 aa14.27□□□□□ -0.12
CCNA1-201ENST00000255465 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.13
CCNA1-201ENST00000255465 NOLC1Q14978 699 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCNA1-201ENST00000255465 C20orf194Q5TEA3 1177 aa14.27□□□□□ -0.13
CCNA1-201ENST00000255465 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
CCNA1-201ENST00000255465 REC8O95072 547 aa14.26□□□□□ -0.13
CCNA1-201ENST00000255465 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
CCNA1-201ENST00000255465 MUM1L1Q5H9M0 696 aa14.26□□□□□ -0.13
CCNA1-201ENST00000255465 CCDC125Q86Z20 511 aa14.26□□□□□ -0.13
CCNA1-201ENST00000255465 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
CCNA1-201ENST00000255465 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
CCNA1-201ENST00000255465 GOLGA6L6A8MZA4 724 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 SETQ01105 290 aaPredicted RBP14.25□□□□□ -0.13
CCNA1-201ENST00000255465 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
CCNA1-201ENST00000255465 CFAP53Q96M91 514 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 BCL9O00512 1426 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 TRIM37O94972 964 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 C22orf23Q9BZE7 217 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 FAM53CQ9NYF3 392 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 DONSONQ9NYP3 566 aa14.25□□□□□ -0.13
CCNA1-201ENST00000255465 DHX16O60231 1041 aaKnown RBP14.24□□□□□ -0.13
CCNA1-201ENST00000255465 TPM3P06753 285 aa14.24□□□□□ -0.13
CCNA1-201ENST00000255465 RBSNQ9H1K0 784 aa14.24□□□□□ -0.13
CCNA1-201ENST00000255465 KDRP35968 1356 aa14.24□□□□□ -0.13
CCNA1-201ENST00000255465 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
CCNA1-201ENST00000255465 CALRP27797 417 aaKnown RBP14.23□□□□□ -0.13
CCNA1-201ENST00000255465 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
CCNA1-201ENST00000255465 UVSSAQ2YD98 709 aa14.23□□□□□ -0.13
CCNA1-201ENST00000255465 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
CCNA1-201ENST00000255465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCNA1-201ENST00000255465 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCNA1-201ENST00000255465 NHSQ6T4R5 1651 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 DOT1LQ8TEK3 1739 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
CCNA1-201ENST00000255465 HMOX1P09601 288 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 CYP2C19P33261 490 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 PCDH11XQ9BZA7 1347 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 PCDH11YQ9BZA8 1340 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 RSPH14Q9UHP6 348 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 SPG7Q9UQ90 795 aa14.22□□□□□ -0.13
CCNA1-201ENST00000255465 PDE3AQ14432 1141 aa14.21□□□□□ -0.13
CCNA1-201ENST00000255465 LRSAM1Q6UWE0 723 aa14.21□□□□□ -0.13
CCNA1-201ENST00000255465 RPAINQ86UA6 219 aa14.21□□□□□ -0.13
CCNA1-201ENST00000255465 GOLGA6L1Q8N7Z2 621 aa14.21□□□□□ -0.13
CCNA1-201ENST00000255465 BSDC1Q9NW68 430 aaPredicted RBP14.21□□□□□ -0.13
CCNA1-201ENST00000255465 CYP27B1O15528 508 aa14.21□□□□□ -0.14
CCNA1-201ENST00000255465 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.14
CCNA1-201ENST00000255465 ITGB4P16144 1822 aa14.2□□□□□ -0.14
CCNA1-201ENST00000255465 BTAF1O14981 1849 aa14.2□□□□□ -0.14
CCNA1-201ENST00000255465 IGSF3O75054 1194 aa14.2□□□□□ -0.14
CCNA1-201ENST00000255465 DEFB132Q7Z7B7 95 aa14.2□□□□□ -0.14
CCNA1-201ENST00000255465 ACSBG1Q96GR2 724 aa14.2□□□□□ -0.14
CCNA1-201ENST00000255465 MED4Q9NPJ6 270 aa14.2□□□□□ -0.14
CCNA1-201ENST00000255465 CASQ1P31415 396 aa14.19□□□□□ -0.14
CCNA1-201ENST00000255465 RAD51AP2Q09MP3 1159 aa14.19□□□□□ -0.14
CCNA1-201ENST00000255465 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
CCNA1-201ENST00000255465 PTF1AQ7RTS3 328 aa14.19□□□□□ -0.14
CCNA1-201ENST00000255465 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
CCNA1-201ENST00000255465 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
CCNA1-201ENST00000255465 KCNQ2O43526 872 aa14.18□□□□□ -0.14
CCNA1-201ENST00000255465 APBA3O96018 575 aa14.18□□□□□ -0.14
CCNA1-201ENST00000255465 BAG6P46379 1132 aa14.18□□□□□ -0.14
CCNA1-201ENST00000255465 NBPF11Q86T75 865 aa14.18□□□□□ -0.14
CCNA1-201ENST00000255465 MAP2K1Q02750 393 aaPredicted RBP14.18□□□□□ -0.14
CCNA1-201ENST00000255465 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
CCNA1-201ENST00000255465 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
CCNA1-201ENST00000255465 FAM184AQ8NB25 1140 aa14.18□□□□□ -0.14
CCNA1-201ENST00000255465 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
CCNA1-201ENST00000255465 PHKG2P15735 406 aa14.17□□□□□ -0.14
CCNA1-201ENST00000255465 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
CCNA1-201ENST00000255465 TXLNBQ8N3L3 684 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms