RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LARGE1O95461 756 aa30.86■■■□□ 2.53
RAB40C-201ENST00000248139 ADCK5Q3MIX3 580 aa30.86■■■□□ 2.53
RAB40C-201ENST00000248139 AACSQ86V21 672 aa30.86■■■□□ 2.53
RAB40C-201ENST00000248139 KAZALD1Q96I82 304 aa30.86■■■□□ 2.53
RAB40C-201ENST00000248139 CCDC8Q9H0W5 538 aaPredicted RBP30.86■■■□□ 2.53
RAB40C-201ENST00000248139 MYL6BP14649 208 aa30.86■■■□□ 2.53
RAB40C-201ENST00000248139 CASTP20810 708 aaKnown RBP30.86■■■□□ 2.53
RAB40C-201ENST00000248139 IFIT2P09913 472 aaKnown RBP30.85■■■□□ 2.53
RAB40C-201ENST00000248139 LRSAM1Q6UWE0 723 aa30.85■■■□□ 2.53
RAB40C-201ENST00000248139 GLRX3O76003 335 aaKnown RBP30.85■■■□□ 2.53
RAB40C-201ENST00000248139 COL9A3Q14050 684 aaPredicted RBP30.85■■■□□ 2.53
RAB40C-201ENST00000248139 TTC14Q96N46 770 aa30.85■■■□□ 2.53
RAB40C-201ENST00000248139 HSP90AB4PQ58FF6 505 aa30.84■■■□□ 2.53
RAB40C-201ENST00000248139 PRPF40BQ6NWY9 871 aaKnown RBP30.84■■■□□ 2.53
RAB40C-201ENST00000248139 USP48Q86UV5 1035 aa30.84■■■□□ 2.53
RAB40C-201ENST00000248139 BICC1Q9H694 974 aaKnown RBP30.84■■■□□ 2.53
RAB40C-201ENST00000248139 ADGRL3Q9HAR2 1447 aa30.84■■■□□ 2.53
RAB40C-201ENST00000248139 DDX17Q92841 729 aaKnown RBP30.84■■■□□ 2.53
RAB40C-201ENST00000248139 TLR7Q9NYK1 1049 aaKnown RBP30.83■■■□□ 2.53
RAB40C-201ENST00000248139 IL17RAQ96F46 866 aa30.83■■■□□ 2.53
RAB40C-201ENST00000248139 ECHDC1Q9NTX5 307 aa30.83■■■□□ 2.53
RAB40C-201ENST00000248139 TCHHQ07283 1943 aa30.82■■■□□ 2.53
RAB40C-201ENST00000248139 RPAP1Q9BWH6 1393 aaPredicted RBP30.82■■■□□ 2.52
RAB40C-201ENST00000248139 SASH1O94885 1247 aa30.81■■■□□ 2.52
RAB40C-201ENST00000248139 FAM227BQ96M60 508 aa30.81■■■□□ 2.52
RAB40C-201ENST00000248139 MTX1Q13505 466 aa30.81■■■□□ 2.52
RAB40C-201ENST00000248139 KRT28Q7Z3Y7 464 aa30.81■■■□□ 2.52
RAB40C-201ENST00000248139 EAF2Q96CJ1 260 aaPredicted RBP30.81■■■□□ 2.52
RAB40C-201ENST00000248139 CNPY2Q9Y2B0 182 aa30.81■■■□□ 2.52
RAB40C-201ENST00000248139 GRM8O00222 908 aa30.8■■■□□ 2.52
RAB40C-201ENST00000248139 JAKMIP1Q96N16 626 aaKnown RBP30.8■■■□□ 2.52
RAB40C-201ENST00000248139 TTC41PQ6P2S7 1318 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 MBD3O95983 291 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 PDIA6Q15084 440 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 WDR33Q9C0J8 1336 aaKnown RBP30.79■■■□□ 2.52
RAB40C-201ENST00000248139 LMO7Q8WWI1 1683 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 ALDH1L1O75891 902 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 ZSCAN30Q86W11 494 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 CCDC83Q8IWF9 413 aa30.79■■■□□ 2.52
RAB40C-201ENST00000248139 LIMCH1Q9UPQ0 1083 aa30.78■■■□□ 2.52
RAB40C-201ENST00000248139 IGKV5-2P06315 115 aa30.78■■■□□ 2.52
RAB40C-201ENST00000248139 RIC3Q7Z5B4 369 aa30.78■■■□□ 2.52
RAB40C-201ENST00000248139 BOLA2Q9H3K6 86 aa30.77■■■□□ 2.52
RAB40C-201ENST00000248139 NLRP2Q9NX02 1062 aa30.77■■■□□ 2.52
RAB40C-201ENST00000248139 SYT1P21579 422 aa30.77■■■□□ 2.52
RAB40C-201ENST00000248139 NFATC2IPQ8NCF5 419 aa30.77■■■□□ 2.52
RAB40C-201ENST00000248139 USP42Q9H9J4 1324 aaKnown RBP30.77■■■□□ 2.52
RAB40C-201ENST00000248139 LINS1Q8NG48 757 aa30.76■■■□□ 2.52
RAB40C-201ENST00000248139 CHMP4AQ9BY43 222 aa30.76■■■□□ 2.51
RAB40C-201ENST00000248139 HYPKQ9NX55 129 aa30.76■■■□□ 2.51
RAB40C-201ENST00000248139 TCEANC2Q96MN5 208 aa30.75■■■□□ 2.51
RAB40C-201ENST00000248139 NECAB1Q8N987 351 aa30.75■■■□□ 2.51
RAB40C-201ENST00000248139 EDC3Q96F86 508 aaKnown RBP30.75■■■□□ 2.51
RAB40C-201ENST00000248139 DDX21Q9NR30 783 aaKnown RBP eCLIP30.75■■■□□ 2.51
RAB40C-201ENST00000248139 HEG1Q9ULI3 1381 aa30.74■■■□□ 2.51
RAB40C-201ENST00000248139 G3BP1Q13283 466 aaKnown RBP eCLIP30.74■■■□□ 2.51
RAB40C-201ENST00000248139 EPHA10Q5JZY3 1008 aa30.74■■■□□ 2.51
RAB40C-201ENST00000248139 MPNDQ8N594 471 aa30.74■■■□□ 2.51
RAB40C-201ENST00000248139 SMC3Q9UQE7 1217 aa30.74■■■□□ 2.51
RAB40C-201ENST00000248139 MSNP26038 577 aaKnown RBP30.73■■■□□ 2.51
RAB40C-201ENST00000248139 NMIQ13287 307 aaPredicted RBP30.73■■■□□ 2.51
RAB40C-201ENST00000248139 ZNF790Q6PG37 636 aa30.73■■■□□ 2.51
RAB40C-201ENST00000248139 CABLES1Q8TDN4 633 aa30.73■■■□□ 2.51
RAB40C-201ENST00000248139 PDRG1Q9NUG6 133 aa30.73■■■□□ 2.51
RAB40C-201ENST00000248139 STX6O43752 255 aa30.72■■■□□ 2.51
RAB40C-201ENST00000248139 KCNJ4P48050 445 aa30.72■■■□□ 2.51
RAB40C-201ENST00000248139 PROSER2Q86WR7 435 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-201ENST00000248139 XAGE3Q8WTP9 111 aa30.72■■■□□ 2.51
RAB40C-201ENST00000248139 PDLIM2Q96JY6 352 aa30.72■■■□□ 2.51
RAB40C-201ENST00000248139 TAF6LQ9Y6J9 622 aa30.72■■■□□ 2.51
RAB40C-201ENST00000248139 NDUFB9Q9Y6M9 179 aa30.72■■■□□ 2.51
RAB40C-201ENST00000248139 EPB41L2O43491 1005 aaKnown RBP30.72■■■□□ 2.51
RAB40C-201ENST00000248139 ZSCAN22P10073 491 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-201ENST00000248139 FIBPO43427 364 aa30.71■■■□□ 2.51
RAB40C-201ENST00000248139 COPS6Q7L5N1 327 aa30.71■■■□□ 2.51
RAB40C-201ENST00000248139 RUFY2Q8WXA3 655 aa30.71■■■□□ 2.51
RAB40C-201ENST00000248139 GPATCH3Q96I76 525 aa30.71■■■□□ 2.51
RAB40C-201ENST00000248139 MYD88Q99836 296 aa30.71■■■□□ 2.51
RAB40C-201ENST00000248139 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.71■■■□□ 2.51
RAB40C-201ENST00000248139 ERBB3P21860 1342 aa30.71■■■□□ 2.51
RAB40C-201ENST00000248139 RBM8AQ9Y5S9 174 aaKnown RBP30.7■■■□□ 2.51
RAB40C-201ENST00000248139 EVI5LQ96CN4 794 aa30.7■■■□□ 2.51
RAB40C-201ENST00000248139 RGPD5Q99666 1765 aa30.7■■■□□ 2.5
RAB40C-201ENST00000248139 DDX58O95786 925 aaKnown RBP30.7■■■□□ 2.5
RAB40C-201ENST00000248139 GJB2P29033 226 aa30.7■■■□□ 2.5
RAB40C-201ENST00000248139 ERC1Q8IUD2 1116 aa30.7■■■□□ 2.5
RAB40C-201ENST00000248139 A0A0D9SFI3 127 aa30.69■■■□□ 2.5
RAB40C-201ENST00000248139 CHGBP05060 677 aa30.69■■■□□ 2.5
RAB40C-201ENST00000248139 RAPGEF4Q8WZA2 1011 aa30.69■■■□□ 2.5
RAB40C-201ENST00000248139 ZNF496Q96IT1 587 aaPredicted RBP30.69■■■□□ 2.5
RAB40C-201ENST00000248139 TSPY26PQ9H489 355 aa30.69■■■□□ 2.5
RAB40C-201ENST00000248139 USP16Q9Y5T5 823 aa30.69■■■□□ 2.5
RAB40C-201ENST00000248139 ST3GAL1Q11201 340 aa30.69■■■□□ 2.5
RAB40C-201ENST00000248139 CCDC171Q6TFL3 1326 aa30.68■■■□□ 2.5
RAB40C-201ENST00000248139 NECTIN1Q15223 517 aa30.68■■■□□ 2.5
RAB40C-201ENST00000248139 CHRNA2Q15822 529 aa30.68■■■□□ 2.5
RAB40C-201ENST00000248139 ME3Q16798 604 aa30.67■■■□□ 2.5
RAB40C-201ENST00000248139 CCDC9Q9Y3X0 531 aaKnown RBP30.67■■■□□ 2.5
RAB40C-201ENST00000248139 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.67■■■□□ 2.5
RAB40C-201ENST00000248139 CYP46A1Q9Y6A2 500 aa30.67■■■□□ 2.5
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