RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ZEB2O60315 1214 aa15.91■□□□□ 0.14
TARDBP-201ENST00000240185 HMGB1P09429 215 aaKnown RBP15.91■□□□□ 0.14
TARDBP-201ENST00000240185 MYL6BP14649 208 aa15.91■□□□□ 0.14
TARDBP-201ENST00000240185 ZBTB16Q05516 673 aa15.91■□□□□ 0.14
TARDBP-201ENST00000240185 LARP6Q9BRS8 491 aaKnown RBP15.91■□□□□ 0.14
TARDBP-201ENST00000240185 IQCGQ9H095 443 aaKnown RBP15.91■□□□□ 0.14
TARDBP-201ENST00000240185 UBASH3AP57075 661 aa15.91■□□□□ 0.14
TARDBP-201ENST00000240185 SEC63Q9UGP8 760 aaKnown RBP15.91■□□□□ 0.14
TARDBP-201ENST00000240185 A0A1B0GUL7 405 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 SARNPP82979 210 aaKnown RBP15.9■□□□□ 0.14
TARDBP-201ENST00000240185 SLFN5Q08AF3 891 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 SPTY2D1Q68D10 685 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-201ENST00000240185 TTC12Q9H892 705 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-201ENST00000240185 CETN1Q12798 172 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
TARDBP-201ENST00000240185 SMAP1Q8IYB5 467 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-201ENST00000240185 DDX12PQ92771 950 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 TSNARE1Q96NA8 513 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 APBB1IPQ7Z5R6 666 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-201ENST00000240185 CPLX4Q7Z7G2 160 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 OGFRQ9NZT2 677 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 TTC14Q96N46 770 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 STIM2Q9P246 746 aa15.9■□□□□ 0.14
TARDBP-201ENST00000240185 SCAPERQ9BY12 1400 aa15.89■□□□□ 0.14
TARDBP-201ENST00000240185 ACTN2P35609 894 aa15.89■□□□□ 0.13
TARDBP-201ENST00000240185 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-201ENST00000240185 NOL3O60936 208 aaKnown RBP15.89■□□□□ 0.13
TARDBP-201ENST00000240185 TMEM266Q2M3C6 531 aa15.89■□□□□ 0.13
TARDBP-201ENST00000240185 CCDC102BQ68D86 513 aa15.89■□□□□ 0.13
TARDBP-201ENST00000240185 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-201ENST00000240185 IDEP14735 1019 aa15.89■□□□□ 0.13
TARDBP-201ENST00000240185 CCT2P78371 535 aaKnown RBP15.89■□□□□ 0.13
TARDBP-201ENST00000240185 TUBB4AP04350 444 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 ZFYP08048 801 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-201ENST00000240185 ZSCAN29Q8IWY8 852 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-201ENST00000240185 CTCFLQ8NI51 663 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-201ENST00000240185 MIPOL1Q8TD10 442 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 BOLA2Q9H3K6 86 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 CYLC1P35663 651 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-201ENST00000240185 CCDC77Q9BR77 488 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 GOLIM4O00461 696 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 DNAJC21Q5F1R6 531 aaKnown RBP15.88■□□□□ 0.13
TARDBP-201ENST00000240185 FAM200AQ8TCP9 573 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 DNAI2Q9GZS0 605 aa15.88■□□□□ 0.13
TARDBP-201ENST00000240185 STMN4Q9H169 189 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-201ENST00000240185 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 ARFGAP2Q8N6H7 521 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 ZBTB9Q96C00 473 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 CCDC129Q6ZRS4 1044 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 SELENOSQ9BQE4 189 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 ANO6Q4KMQ2 910 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 MINDY4BA8MYZ0 360 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 PRC1O43663 620 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 TNIP1Q15025 636 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 PPFIBP2Q8ND30 876 aa15.87■□□□□ 0.13
TARDBP-201ENST00000240185 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 CFAP70Q5T0N1 1121 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 SREK1Q8WXA9 508 aaKnown RBP15.86■□□□□ 0.13
TARDBP-201ENST00000240185 ABCF2Q9UG63 623 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■□□□□ 9.2
TARDBP-201ENST00000240185 CTAGE9A4FU28 777 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.13
TARDBP-201ENST00000240185 SSRP1Q08945 709 aaKnown RBP15.86■□□□□ 0.13
TARDBP-201ENST00000240185 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 KIF3CO14782 793 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 PSMD1Q99460 953 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 PLVAPQ9BX97 442 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 AMPD3Q01432 767 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 NAPBQ9H115 298 aa15.86■□□□□ 0.13
TARDBP-201ENST00000240185 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
TARDBP-201ENST00000240185 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
TARDBP-201ENST00000240185 KRBA2Q6ZNG9 492 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 LACTBP83111 547 aaPredicted RBP15.85■□□□□ 0.13
TARDBP-201ENST00000240185 SELENOOQ9BVL4 669 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 GOLGA8AA7E2F4 631 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 NLRP5P59047 1200 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 TRIM47Q96LD4 638 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 GTF3C6Q969F1 213 aa15.85■□□□□ 0.13
TARDBP-201ENST00000240185 FEZ2Q9UHY8 353 aaPredicted RBP15.85■□□□□ 0.13
TARDBP-201ENST00000240185 ANKRD30BQ9BXX2 1392 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 TCP11L1Q9NUJ3 509 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 RASAL2Q9UJF2 1139 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 TACC1O75410 805 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 SYT1P21579 422 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 RAB3IL1Q8TBN0 382 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 SAMD15Q9P1V8 674 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 FAM76AQ8TAV0 307 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
TARDBP-201ENST00000240185 TUBB4BP68371 445 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 HSP90AA4PQ58FG1 418 aa15.84■□□□□ 0.13
TARDBP-201ENST00000240185 CCDC85AQ96PX6 553 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms