RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
TGFB3-201ENST00000238682 SLC52A2Q9HAB3 445 aa11.89□□□□□ -0.51
TGFB3-201ENST00000238682 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
TGFB3-201ENST00000238682 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
TGFB3-201ENST00000238682 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.89□□□□□ -0.51
TGFB3-201ENST00000238682 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
TGFB3-201ENST00000238682 MSH5O43196 834 aa11.88□□□□□ -0.51
TGFB3-201ENST00000238682 GPR162Q16538 588 aa11.88□□□□□ -0.51
TGFB3-201ENST00000238682 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-201ENST00000238682 EP400Q96L91 3159 aa11.88□□□□□ -0.51
TGFB3-201ENST00000238682 GNPATO15228 680 aa11.88□□□□□ -0.51
TGFB3-201ENST00000238682 MS4A1P11836 297 aa11.88□□□□□ -0.51
TGFB3-201ENST00000238682 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
TGFB3-201ENST00000238682 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
TGFB3-201ENST00000238682 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
TGFB3-201ENST00000238682 TEFQ10587 303 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 ITPK1Q13572 414 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 AAMPQ13685 434 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 TMCO4Q5TGY1 634 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 CACNA1FO60840 1977 aa11.87□□□□□ -0.51
TGFB3-201ENST00000238682 RCAN3Q9UKA8 241 aa11.86□□□□□ -0.51
TGFB3-201ENST00000238682 LAMB4A4D0S4 1761 aa11.86□□□□□ -0.51
TGFB3-201ENST00000238682 HEG1Q9ULI3 1381 aa11.86□□□□□ -0.51
TGFB3-201ENST00000238682 ADCY9O60503 1353 aa11.85□□□□□ -0.51
TGFB3-201ENST00000238682 RFC4P35249 363 aa11.85□□□□□ -0.51
TGFB3-201ENST00000238682 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
TGFB3-201ENST00000238682 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
TGFB3-201ENST00000238682 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
TGFB3-201ENST00000238682 IBTKQ9P2D0 1353 aaPredicted RBP11.84□□□□□ -0.51
TGFB3-201ENST00000238682 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
TGFB3-201ENST00000238682 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
TGFB3-201ENST00000238682 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
TGFB3-201ENST00000238682 TSPYL4Q9UJ04 414 aa11.84□□□□□ -0.51
TGFB3-201ENST00000238682 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
TGFB3-201ENST00000238682 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 MCM10Q7L590 875 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 ARHGAP45Q92619 1136 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 STARD3NLO95772 234 aa11.83□□□□□ -0.52
TGFB3-201ENST00000238682 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
TGFB3-201ENST00000238682 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
TGFB3-201ENST00000238682 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
TGFB3-201ENST00000238682 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
TGFB3-201ENST00000238682 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
TGFB3-201ENST00000238682 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
TGFB3-201ENST00000238682 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
TGFB3-201ENST00000238682 ZNF784Q8NCA9 323 aaPredicted RBP11.82□□□□□ -0.52
TGFB3-201ENST00000238682 RNF216Q9NWF9 866 aaPredicted RBP11.82□□□□□ -0.52
TGFB3-201ENST00000238682 IPO8O15397 1037 aaKnown RBP11.81□□□□□ -0.52
TGFB3-201ENST00000238682 CLUAP1Q96AJ1 413 aa11.81□□□□□ -0.52
TGFB3-201ENST00000238682 GYS1P13807 737 aa11.81□□□□□ -0.52
TGFB3-201ENST00000238682 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
TGFB3-201ENST00000238682 NFATC2IPQ8NCF5 419 aa11.81□□□□□ -0.52
TGFB3-201ENST00000238682 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
TGFB3-201ENST00000238682 VAMP4O75379 141 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 MMP10P09238 476 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
TGFB3-201ENST00000238682 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
TGFB3-201ENST00000238682 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
TGFB3-201ENST00000238682 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
TGFB3-201ENST00000238682 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 PHF14O94880 888 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
TGFB3-201ENST00000238682 KCNQ4P56696 695 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
TGFB3-201ENST00000238682 N4BP2Q86UW6 1770 aaPredicted RBP11.8□□□□□ -0.52
TGFB3-201ENST00000238682 PTPRCP08575 1304 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 ZPR1O75312 459 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
TGFB3-201ENST00000238682 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
TGFB3-201ENST00000238682 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 COL15A1P39059 1388 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
TGFB3-201ENST00000238682 DCTN1Q14203 1278 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
TGFB3-201ENST00000238682 DLEC1Q9Y238 1755 aa11.78□□□□□ -0.52
TGFB3-201ENST00000238682 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
TGFB3-201ENST00000238682 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
TGFB3-201ENST00000238682 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
TGFB3-201ENST00000238682 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
TGFB3-201ENST00000238682 THUMPD2Q9BTF0 503 aaKnown RBP11.78□□□□□ -0.52
TGFB3-201ENST00000238682 TM4SF1P30408 202 aa11.77□□□□□ -0.53
TGFB3-201ENST00000238682 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
TGFB3-201ENST00000238682 PPP4R2Q9NY27 417 aa11.77□□□□□ -0.53
TGFB3-201ENST00000238682 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.53
TGFB3-201ENST00000238682 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
TGFB3-201ENST00000238682 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
TGFB3-201ENST00000238682 IRF5Q13568 498 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms