RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ST3GAL1Q11201 340 aa18.54■□□□□ 0.56
DDX55-201ENST00000238146 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
DDX55-201ENST00000238146 USP42Q9H9J4 1324 aaKnown RBP18.54■□□□□ 0.56
DDX55-201ENST00000238146 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
DDX55-201ENST00000238146 BABAM1Q9NWV8 329 aa18.54■□□□□ 0.56
DDX55-201ENST00000238146 TPM3P06753 285 aa18.53■□□□□ 0.56
DDX55-201ENST00000238146 ZSCAN20P17040 1043 aaPredicted RBP18.53■□□□□ 0.56
DDX55-201ENST00000238146 ZSCAN31Q96LW9 406 aaPredicted RBP18.53■□□□□ 0.56
DDX55-201ENST00000238146 ZSWIM6Q9HCJ5 1215 aa18.53■□□□□ 0.56
DDX55-201ENST00000238146 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
DDX55-201ENST00000238146 DIAPH3Q9NSV4 1193 aa18.53■□□□□ 0.56
DDX55-201ENST00000238146 ADAMTS13Q76LX8 1427 aa18.53■□□□□ 0.56
DDX55-201ENST00000238146 VPS37CA5D8V6 355 aaPredicted RBP18.53■□□□□ 0.56
DDX55-201ENST00000238146 GLRX3O76003 335 aaKnown RBP18.53■□□□□ 0.56
DDX55-201ENST00000238146 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
DDX55-201ENST00000238146 PRPF40BQ6NWY9 871 aaKnown RBP18.53■□□□□ 0.56
DDX55-201ENST00000238146 TM6SF1Q9BZW5 370 aa18.52■□□□□ 0.56
DDX55-201ENST00000238146 TTC41PQ6P2S7 1318 aa18.52■□□□□ 0.56
DDX55-201ENST00000238146 ME3Q16798 604 aa18.52■□□□□ 0.55
DDX55-201ENST00000238146 KCNB2Q92953 911 aa18.52■□□□□ 0.55
DDX55-201ENST00000238146 CYP46A1Q9Y6A2 500 aa18.52■□□□□ 0.55
DDX55-201ENST00000238146 PPP4R3BQ5MIZ7 849 aa18.51■□□□□ 0.55
DDX55-201ENST00000238146 RUFY2Q8WXA3 655 aa18.51■□□□□ 0.55
DDX55-201ENST00000238146 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
DDX55-201ENST00000238146 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
DDX55-201ENST00000238146 DMTNQ08495 405 aa18.51■□□□□ 0.55
DDX55-201ENST00000238146 HSP90AB4PQ58FF6 505 aa18.51■□□□□ 0.55
DDX55-201ENST00000238146 CRYBG1Q9Y4K1 1723 aa18.51■□□□□ 0.55
DDX55-201ENST00000238146 CBX1P83916 185 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 ATP2B3Q16720 1220 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 BEND3Q5T5X7 828 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 TTC6Q86TZ1 520 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 GOLGA6L6A8MZA4 724 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 UTP14CQ5TAP6 766 aaKnown RBP18.5■□□□□ 0.55
DDX55-201ENST00000238146 FAM200AQ8TCP9 573 aa18.5■□□□□ 0.55
DDX55-201ENST00000238146 DDX54Q8TDD1 881 aaKnown RBP18.5■□□□□ 0.55
DDX55-201ENST00000238146 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
DDX55-201ENST00000238146 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
DDX55-201ENST00000238146 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
DDX55-201ENST00000238146 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
DDX55-201ENST00000238146 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
DDX55-201ENST00000238146 PI4KAP2A4QPH2 592 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 OS9Q13438 667 aaPredicted RBP18.48■□□□□ 0.55
DDX55-201ENST00000238146 PI4KAP1Q8N8J0 262 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 DNAAF4Q8WXU2 420 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 LIG1P18858 919 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 MAP3K11Q16584 847 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
DDX55-201ENST00000238146 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
DDX55-201ENST00000238146 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 MRVI1Q9Y6F6 885 aa18.48■□□□□ 0.55
DDX55-201ENST00000238146 PTGS1P23219 599 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 HOXC9P31274 260 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 KRT85P78386 507 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 CAMK4Q16566 473 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
DDX55-201ENST00000238146 NUP62CLQ9H1M0 184 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 ECHDC1Q9NTX5 307 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 TYRO3Q06418 890 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 FERMT3Q86UX7 667 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 PDCL2Q8N4E4 241 aa18.47■□□□□ 0.55
DDX55-201ENST00000238146 CDC37L1Q7L3B6 337 aa18.46■□□□□ 0.55
DDX55-201ENST00000238146 LUZP1Q86V48 1076 aa18.46■□□□□ 0.55
DDX55-201ENST00000238146 ANKRD7Q92527 254 aa18.46■□□□□ 0.55
DDX55-201ENST00000238146 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
DDX55-201ENST00000238146 ZHX1Q9UKY1 873 aaPredicted RBP18.46■□□□□ 0.55
DDX55-201ENST00000238146 ELP1O95163 1332 aa18.46■□□□□ 0.55
DDX55-201ENST00000238146 CCDC171Q6TFL3 1326 aa18.46■□□□□ 0.55
DDX55-201ENST00000238146 CTIFO43310 598 aaKnown RBP18.46■□□□□ 0.55
DDX55-201ENST00000238146 ZKSCAN1P17029 563 aaPredicted RBP18.46■□□□□ 0.55
DDX55-201ENST00000238146 ESF1Q9H501 851 aaKnown RBP18.46■□□□□ 0.55
DDX55-201ENST00000238146 NLRP6P59044 892 aa18.46■□□□□ 0.54
DDX55-201ENST00000238146 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.54
DDX55-201ENST00000238146 RBM8AQ9Y5S9 174 aaKnown RBP18.46■□□□□ 0.54
DDX55-201ENST00000238146 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
DDX55-201ENST00000238146 TNRQ92752 1358 aa18.45■□□□□ 0.54
DDX55-201ENST00000238146 LTKP29376 864 aa18.45■□□□□ 0.54
DDX55-201ENST00000238146 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
DDX55-201ENST00000238146 MTX1Q13505 466 aa18.45■□□□□ 0.54
DDX55-201ENST00000238146 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
DDX55-201ENST00000238146 CKAP2LQ8IYA6 745 aa18.44■□□□□ 0.54
DDX55-201ENST00000238146 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
DDX55-201ENST00000238146 CCDC186Q7Z3E2 898 aa18.44■□□□□ 0.54
DDX55-201ENST00000238146 DACT1Q9NYF0 836 aa18.44■□□□□ 0.54
DDX55-201ENST00000238146 ANXA1P04083 346 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 PDIA4P13667 645 aaKnown RBP18.43■□□□□ 0.54
DDX55-201ENST00000238146 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 CBX8Q9HC52 389 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 PIK3C2AO00443 1686 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 ANO6Q4KMQ2 910 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 TNMDQ9H2S6 317 aa18.43■□□□□ 0.54
DDX55-201ENST00000238146 SPDYE4A6NLX3 237 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
DDX55-201ENST00000238146 PDCP20941 246 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms