RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 DNAI1Q9UI46 699 aa9.45□□□□□ -0.9
APOB-201ENST00000233242 UBASH3AP57075 661 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
APOB-201ENST00000233242 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
APOB-201ENST00000233242 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 EXOC6BQ9Y2D4 811 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 AMPD3Q01432 767 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 ZHX3Q9H4I2 956 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 ZNF287Q9HBT7 754 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 FAM76AQ8TAV0 307 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 CCDC172P0C7W6 258 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
APOB-201ENST00000233242 IKQ13123 557 aaPredicted RBP9.44□□□□□ -0.9
APOB-201ENST00000233242 RNF41Q9H4P4 317 aaPredicted RBP9.44□□□□□ -0.9
APOB-201ENST00000233242 CETN1Q12798 172 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 NPHP3Q7Z494 1330 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 SETSIPP0DME0 302 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 WDR66Q8TBY9 1149 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
APOB-201ENST00000233242 MAP4K4O95819 1239 aaPredicted RBP9.44□□□□□ -0.9
APOB-201ENST00000233242 SYT1P21579 422 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 PRPHP41219 470 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 KDM4AO75164 1064 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 SIL1Q9H173 461 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 A0A087WZG4 1122 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 MICALL1Q8N3F8 863 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 NSD3Q9BZ95 1437 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 TACC1O75410 805 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 PRIM1P49642 420 aaKnown RBP9.43□□□□□ -0.9
APOB-201ENST00000233242 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 CCDC77Q9BR77 488 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 LRRC27Q9C0I9 530 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 AIDAQ96BJ3 306 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 DNAI2Q9GZS0 605 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 KIF5BP33176 963 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 KRT83P78385 493 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 ANO6Q4KMQ2 910 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
APOB-201ENST00000233242 N4BP3O15049 544 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
APOB-201ENST00000233242 IBSPP21815 317 aaPredicted RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 TYRO3Q06418 890 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 CCDC6Q16204 474 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 CFAP57Q96MR6 1250 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 ARHGAP5Q13017 1502 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 GIMAP6Q6P9H5 292 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 KIF4AO95239 1232 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 SEPT6Q14141 434 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 TMEM266Q2M3C6 531 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 CCDC129Q6ZRS4 1044 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 CEP57Q86XR8 500 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 ATRIPQ8WXE1 791 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 MRPS27Q92552 414 aaKnown RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.9
APOB-201ENST00000233242 TDRD12Q587J7 1177 aaKnown RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 PIBF1Q8WXW3 757 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 RALGAPBQ86X10 1494 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 DNAJC21Q5F1R6 531 aaKnown RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 SYKP43405 635 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 UBE4AQ14139 1066 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 DAAM2Q86T65 1068 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 CCDC114Q96M63 670 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 HYPKQ9NX55 129 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 SLC12A7Q9Y666 1083 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 TRIM21P19474 475 aaKnown RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 MTIF2P46199 727 aaKnown RBP9.42□□□□□ -0.9
APOB-201ENST00000233242 FKBP4Q02790 459 aaKnown RBP eCLIP9.42□□□□□ -0.9
APOB-201ENST00000233242 SELENOOQ9BVL4 669 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 LIG1P18858 919 aa9.42□□□□□ -0.9
APOB-201ENST00000233242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
APOB-201ENST00000233242 VAV2P52735 878 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
APOB-201ENST00000233242 DDX46Q7L014 1031 aaKnown RBP9.41□□□□□ -0.9
APOB-201ENST00000233242 ARHGAP25P42331 645 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 IFT74Q96LB3 600 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 CEP83Q9Y592 693 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 AKR1B10O60218 316 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 ZNF530Q6P9A1 599 aaPredicted RBP9.41□□□□□ -0.9
APOB-201ENST00000233242 SLC52A1Q9NWF4 448 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 SH3BGRP55822 239 aaPredicted RBP9.41□□□□□ -0.9
APOB-201ENST00000233242 TMEM132EQ6IEE7 984 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 KRT86O43790 486 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 KIAA0753Q2KHM9 967 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 MPHOSPH8Q99549 860 aa9.41□□□□□ -0.9
APOB-201ENST00000233242 SSRP1Q08945 709 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms