RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 VPS36Q86VN1 386 aa13.46□□□□□ -0.26
PCDH12-201ENST00000231484 TMX3Q96JJ7 454 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 BRD2P25440 801 aaKnown RBP13.45□□□□□ -0.26
PCDH12-201ENST00000231484 CPLX4Q7Z7G2 160 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDH12-201ENST00000231484 MIPOL1Q8TD10 442 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 FEZ2Q9UHY8 353 aaPredicted RBP13.45□□□□□ -0.26
PCDH12-201ENST00000231484 AACSQ86V21 672 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
PCDH12-201ENST00000231484 ZHX3Q9H4I2 956 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 GCKP35557 465 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 CETN2P41208 172 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 ARHGAP25P42331 645 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 ELF2Q15723 593 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 CERS3Q8IU89 383 aa13.45□□□□□ -0.26
PCDH12-201ENST00000231484 NAP1L3Q99457 506 aaPredicted RBP13.45□□□□□ -0.26
PCDH12-201ENST00000231484 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
PCDH12-201ENST00000231484 TTC39AQ5SRH9 613 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 STMN4Q9H169 189 aaPredicted RBP13.44□□□□□ -0.26
PCDH12-201ENST00000231484 KIF3CO14782 793 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 TYRO3Q06418 890 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 DNAJC25Q9H1X3 360 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 OAS2P29728 719 aaKnown RBP13.44□□□□□ -0.26
PCDH12-201ENST00000231484 TDRD12Q587J7 1177 aaKnown RBP13.44□□□□□ -0.26
PCDH12-201ENST00000231484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDH12-201ENST00000231484 A6NNZ2 444 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
PCDH12-201ENST00000231484 PPP2R3AQ06190 1150 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 TUBB8Q3ZCM7 444 aa13.44□□□□□ -0.26
PCDH12-201ENST00000231484 ZNF500O60304 480 aaPredicted RBP13.43□□□□□ -0.26
PCDH12-201ENST00000231484 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 ATP11AP98196 1134 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 RHOXF2BP0C7M4 288 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 RHOXF2Q9BQY4 288 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 PUF60Q9UHX1 559 aaKnown RBP13.43□□□□□ -0.26
PCDH12-201ENST00000231484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.43□□□□□ -0.26
PCDH12-201ENST00000231484 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 TTC14Q96N46 770 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 SAMD15Q9P1V8 674 aa13.43□□□□□ -0.26
PCDH12-201ENST00000231484 LUC7L2Q9Y383 392 aaKnown RBP13.43□□□□□ -0.26
PCDH12-201ENST00000231484 FSD2A1L4K1 749 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 FGFR1OPO95684 399 aaKnown RBP13.42□□□□□ -0.26
PCDH12-201ENST00000231484 PCK1P35558 622 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 PPFIBP2Q8ND30 876 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 TSG101Q99816 390 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 NDUFAB1O14561 156 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 TMEM132EQ6IEE7 984 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDH12-201ENST00000231484 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 ZNF445P59923 1031 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
PCDH12-201ENST00000231484 DUSP27Q5VZP5 1158 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 ZSCAN16Q9H4T2 348 aaPredicted RBP13.41□□□□□ -0.26
PCDH12-201ENST00000231484 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
PCDH12-201ENST00000231484 GUCY1B3Q02153 619 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
PCDH12-201ENST00000231484 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 SELENOSQ9BQE4 189 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 SUDS3Q9H7L9 328 aaPredicted RBP13.41□□□□□ -0.26
PCDH12-201ENST00000231484 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
PCDH12-201ENST00000231484 CTAGE1Q96RT6 745 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 STIM2Q9P246 746 aa13.41□□□□□ -0.26
PCDH12-201ENST00000231484 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
PCDH12-201ENST00000231484 GAS2L2Q8NHY3 880 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 GBP1P32455 592 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 CYLC1P35663 651 aaPredicted RBP13.4□□□□□ -0.26
PCDH12-201ENST00000231484 EXOC6BQ9Y2D4 811 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 DACT1Q9NYF0 836 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 NACAP1Q9BZK3 213 aa13.4□□□□□ -0.26
PCDH12-201ENST00000231484 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
PCDH12-201ENST00000231484 CCDC172P0C7W6 258 aa13.4□□□□□ -0.27
PCDH12-201ENST00000231484 VCXQ9H320 206 aa13.4□□□□□ -0.27
PCDH12-201ENST00000231484 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 MXRA7P84157 204 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
PCDH12-201ENST00000231484 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 KANK3Q6NY19 840 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 NOL3O60936 208 aaKnown RBP13.39□□□□□ -0.27
PCDH12-201ENST00000231484 F13A1P00488 732 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 IFI16Q16666 785 aaKnown RBP13.39□□□□□ -0.27
PCDH12-201ENST00000231484 HOOK3Q86VS8 718 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
PCDH12-201ENST00000231484 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 ZBTB9Q96C00 473 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
PCDH12-201ENST00000231484 SPATS2LQ9NUQ6 558 aaKnown RBP13.39□□□□□ -0.27
PCDH12-201ENST00000231484 RBBP5Q15291 538 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms