RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 C8orf37Q96NL8 207 aa10.46□□□□□ -0.73
CCL1-201ENST00000225842 RTEL1-TNFRSF6BF6WH68 1400 aa10.46□□□□□ -0.74
CCL1-201ENST00000225842 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
CCL1-201ENST00000225842 ADGBQ8N7X0 1667 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 CCDC18Q5T9S5 1454 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 CCNB3Q8WWL7 1395 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 ZNF644Q9H582 1327 aaPredicted RBP10.45□□□□□ -0.74
CCL1-201ENST00000225842 H3BRB1 525 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 RNF20Q5VTR2 975 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 LHX8Q68G74 356 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 TAS1R3Q7RTX0 852 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 MTRQ99707 1265 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 HINFPQ9BQA5 517 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 SLC6A16Q9GZN6 736 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 TUT1Q9H6E5 874 aaKnown RBP10.45□□□□□ -0.74
CCL1-201ENST00000225842 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
CCL1-201ENST00000225842 PCDHB11Q9Y5F2 797 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 PCDHGA11Q9Y5H2 935 aa10.45□□□□□ -0.74
CCL1-201ENST00000225842 PRDM15P57071 1507 aaPredicted RBP10.44□□□□□ -0.74
CCL1-201ENST00000225842 ANKRD33BA6NCL7 494 aa10.44□□□□□ -0.74
CCL1-201ENST00000225842 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
CCL1-201ENST00000225842 THSD4Q6ZMP0 1018 aa10.44□□□□□ -0.74
CCL1-201ENST00000225842 CCDC125Q86Z20 511 aa10.44□□□□□ -0.74
CCL1-201ENST00000225842 GIPC2Q8TF65 315 aa10.44□□□□□ -0.74
CCL1-201ENST00000225842 CDC42BPAQ5VT25 1732 aa10.44□□□□□ -0.74
CCL1-201ENST00000225842 LRRIQ1Q96JM4 1722 aa10.44□□□□□ -0.74
CCL1-201ENST00000225842 COL16A1Q07092 1604 aaPredicted RBP10.44□□□□□ -0.74
CCL1-201ENST00000225842 ERVK-7P63135 1459 aa10.43□□□□□ -0.74
CCL1-201ENST00000225842 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
CCL1-201ENST00000225842 ARHGAP23Q9P227 1491 aa10.43□□□□□ -0.74
CCL1-201ENST00000225842 ZNF511Q8NB15 262 aa10.43□□□□□ -0.74
CCL1-201ENST00000225842 MKNK1Q9BUB5 465 aa10.43□□□□□ -0.74
CCL1-201ENST00000225842 SLIT1O75093 1534 aa10.43□□□□□ -0.74
CCL1-201ENST00000225842 RAB15P59190 212 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 USP4Q13107 963 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 GLYCTKQ8IVS8 523 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 ZNF516Q92618 1163 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 SEPT3Q9UH03 358 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 EGFL7Q9UHF1 273 aa10.42□□□□□ -0.74
CCL1-201ENST00000225842 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
CCL1-201ENST00000225842 TMEM2Q9UHN6 1383 aa10.41□□□□□ -0.74
CCL1-201ENST00000225842 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
CCL1-201ENST00000225842 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
CCL1-201ENST00000225842 ICMTO60725 284 aa10.4□□□□□ -0.74
CCL1-201ENST00000225842 NBPF20Q3BBV1 942 aa10.4□□□□□ -0.74
CCL1-201ENST00000225842 NPAS4Q8IUM7 802 aa10.4□□□□□ -0.74
CCL1-201ENST00000225842 TSEN2Q8NCE0 465 aaKnown RBP10.4□□□□□ -0.74
CCL1-201ENST00000225842 GAS2L2Q8NHY3 880 aa10.4□□□□□ -0.74
CCL1-201ENST00000225842 GTF3C2Q8WUA4 911 aaPredicted RBP10.4□□□□□ -0.74
CCL1-201ENST00000225842 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.74
CCL1-201ENST00000225842 MBD5Q9P267 1494 aa10.4□□□□□ -0.74
CCL1-201ENST00000225842 ABCC3O15438 1527 aa10.39□□□□□ -0.75
CCL1-201ENST00000225842 ESPNB1AK53 854 aa10.39□□□□□ -0.75
CCL1-201ENST00000225842 ATF3P18847 181 aa10.39□□□□□ -0.75
CCL1-201ENST00000225842 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
CCL1-201ENST00000225842 FCF1Q9Y324 198 aaKnown RBP10.39□□□□□ -0.75
CCL1-201ENST00000225842 TIAM1Q13009 1591 aa10.39□□□□□ -0.75
CCL1-201ENST00000225842 S1PR4O95977 384 aa10.38□□□□□ -0.75
CCL1-201ENST00000225842 YY1P25490 414 aa10.38□□□□□ -0.75
CCL1-201ENST00000225842 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
CCL1-201ENST00000225842 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
CCL1-201ENST00000225842 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
CCL1-201ENST00000225842 DNMT3AQ9Y6K1 912 aaPredicted RBP10.38□□□□□ -0.75
CCL1-201ENST00000225842 MAPK1P28482 360 aa10.37□□□□□ -0.75
CCL1-201ENST00000225842 BRINP3Q76B58 766 aa10.37□□□□□ -0.75
CCL1-201ENST00000225842 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCL1-201ENST00000225842 C1QTNF2Q9BXJ5 285 aa10.37□□□□□ -0.75
CCL1-201ENST00000225842 IL21Q9HBE4 155 aa10.37□□□□□ -0.75
CCL1-201ENST00000225842 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
CCL1-201ENST00000225842 UBR1Q8IWV7 1749 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 WEE1P30291 646 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 SH3BP2P78314 561 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 FKBP5Q13451 457 aaPredicted RBP10.36□□□□□ -0.75
CCL1-201ENST00000225842 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 NYAP1Q6ZVC0 841 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 LRRC59Q96AG4 307 aaKnown RBP10.36□□□□□ -0.75
CCL1-201ENST00000225842 C19orf44Q9H6X5 657 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 PCDH10Q9P2E7 1040 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 USP21Q9UK80 565 aa10.36□□□□□ -0.75
CCL1-201ENST00000225842 TRPC5Q9UL62 973 aaPredicted RBP10.36□□□□□ -0.75
CCL1-201ENST00000225842 AHDC1Q5TGY3 1603 aaPredicted RBP10.36□□□□□ -0.75
CCL1-201ENST00000225842 SHPRHQ149N8 1683 aa10.35□□□□□ -0.75
CCL1-201ENST00000225842 C21orf2O43822 256 aa10.35□□□□□ -0.75
CCL1-201ENST00000225842 MYCP01106 439 aaPredicted RBP10.35□□□□□ -0.75
CCL1-201ENST00000225842 TSPY4P0CV99 314 aa10.35□□□□□ -0.75
CCL1-201ENST00000225842 TSPY10P0CW01 314 aa10.35□□□□□ -0.75
CCL1-201ENST00000225842 SEPT12Q8IYM1 358 aa10.35□□□□□ -0.75
CCL1-201ENST00000225842 NKX2-3Q8TAU0 364 aa10.35□□□□□ -0.75
CCL1-201ENST00000225842 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 SCTRP47872 440 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 PTPN5P54829 565 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 TAGLNQ01995 201 aaKnown RBP10.33□□□□□ -0.76
CCL1-201ENST00000225842 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCL1-201ENST00000225842 NAA30Q147X3 362 aaPredicted RBP10.33□□□□□ -0.76
CCL1-201ENST00000225842 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
CCL1-201ENST00000225842 DEFB132Q7Z7B7 95 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 TRMT44Q8IYL2 757 aaKnown RBP10.33□□□□□ -0.76
CCL1-201ENST00000225842 KCTD15Q96SI1 283 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms