RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 WDR63Q8IWG1 891 aa16.45■□□□□ 0.22
LSM5-201ENST00000223084 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
LSM5-201ENST00000223084 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
LSM5-201ENST00000223084 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
LSM5-201ENST00000223084 IL16Q14005 1332 aa16.45■□□□□ 0.22
LSM5-201ENST00000223084 HOXB7P09629 217 aa16.44■□□□□ 0.22
LSM5-201ENST00000223084 ZBTB3Q9H5J0 574 aa16.44■□□□□ 0.22
LSM5-201ENST00000223084 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
LSM5-201ENST00000223084 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
LSM5-201ENST00000223084 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
LSM5-201ENST00000223084 GPR162Q16538 588 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 SETDB2Q96T68 719 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
LSM5-201ENST00000223084 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
LSM5-201ENST00000223084 N4BP2Q86UW6 1770 aaPredicted RBP16.43■□□□□ 0.22
LSM5-201ENST00000223084 DPEP1P16444 411 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
LSM5-201ENST00000223084 NUP98P52948 1817 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
LSM5-201ENST00000223084 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
LSM5-201ENST00000223084 ERVV-1B6SEH8 477 aa16.41■□□□□ 0.22
LSM5-201ENST00000223084 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.226e-9■□□□□ 9
LSM5-201ENST00000223084 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
LSM5-201ENST00000223084 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
LSM5-201ENST00000223084 CHRNA5P30532 468 aa16.4■□□□□ 0.22
LSM5-201ENST00000223084 TGFB2P61812 414 aa16.4■□□□□ 0.22
LSM5-201ENST00000223084 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
LSM5-201ENST00000223084 ZNF521Q96K83 1311 aa16.4■□□□□ 0.22
LSM5-201ENST00000223084 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
LSM5-201ENST00000223084 GPTP24298 496 aa16.39■□□□□ 0.21
LSM5-201ENST00000223084 PRR5LQ6MZQ0 368 aa16.39■□□□□ 0.21
LSM5-201ENST00000223084 RGL2O15211 777 aa16.38■□□□□ 0.21
LSM5-201ENST00000223084 NPHP1O15259 732 aa16.38■□□□□ 0.21
LSM5-201ENST00000223084 KCNA3P22001 575 aa16.38■□□□□ 0.21
LSM5-201ENST00000223084 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
LSM5-201ENST00000223084 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
LSM5-201ENST00000223084 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
LSM5-201ENST00000223084 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
LSM5-201ENST00000223084 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
LSM5-201ENST00000223084 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
LSM5-201ENST00000223084 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
LSM5-201ENST00000223084 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
LSM5-201ENST00000223084 ANKRD31Q8N7Z5 1873 aa16.36■□□□□ 0.21
LSM5-201ENST00000223084 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
LSM5-201ENST00000223084 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
LSM5-201ENST00000223084 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
LSM5-201ENST00000223084 UBN2Q6ZU65 1347 aa16.36■□□□□ 0.21
LSM5-201ENST00000223084 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
LSM5-201ENST00000223084 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
LSM5-201ENST00000223084 ZNF34Q8IZ26 560 aa16.35■□□□□ 0.21
LSM5-201ENST00000223084 BCS1LQ9Y276 419 aa16.35■□□□□ 0.21
LSM5-201ENST00000223084 VAMP4O75379 141 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 ST5P78524 1137 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 PLBD2Q8NHP8 589 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
LSM5-201ENST00000223084 GOLGB1Q14789 3259 aaKnown RBP16.34■□□□□ 0.21
LSM5-201ENST00000223084 BRCA1P38398 1863 aaKnown RBP16.33■□□□□ 0.21
LSM5-201ENST00000223084 CDCA7LQ96GN5 454 aa16.33■□□□□ 0.2
LSM5-201ENST00000223084 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
LSM5-201ENST00000223084 H0YIN7 160 aa16.32■□□□□ 0.2
LSM5-201ENST00000223084 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
LSM5-201ENST00000223084 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
LSM5-201ENST00000223084 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
LSM5-201ENST00000223084 ERFEQ4G0M1 354 aa16.32■□□□□ 0.2
LSM5-201ENST00000223084 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
LSM5-201ENST00000223084 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
LSM5-201ENST00000223084 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
LSM5-201ENST00000223084 PDE6BP35913 854 aa16.31■□□□□ 0.2
LSM5-201ENST00000223084 G2E3Q7L622 706 aa16.31■□□□□ 0.2
LSM5-201ENST00000223084 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
LSM5-201ENST00000223084 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.29e-7■□□□□ 9.3
LSM5-201ENST00000223084 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
LSM5-201ENST00000223084 E9PSI1 815 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 NTSR2O95665 410 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 SLFN5Q08AF3 891 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
LSM5-201ENST00000223084 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
LSM5-201ENST00000223084 COL11A2P13942 1736 aaPredicted RBP16.3■□□□□ 0.2
LSM5-201ENST00000223084 CHD4Q14839 1912 aa16.29■□□□□ 0.2
LSM5-201ENST00000223084 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
LSM5-201ENST00000223084 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms