RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 LIMCH1Q9UPQ0 1083 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 CCDC27Q2M243 656 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 BMP2KLQ5H9B9 411 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 RASEFQ8IZ41 740 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 TRMT1Q9NXH9 659 aaKnown RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 TCP11Q8WWU5 503 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 RAB3IPQ96QF0 476 aaPredicted RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 IRX5P78411 483 aaPredicted RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 CREB3O43889 395 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 IMPACTQ9P2X3 320 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 CCDC144AA2RUR9 1427 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 DESP17661 470 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 TSGA10Q9BZW7 698 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 GOLGA6CA6NDK9 693 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 GOLGA6DP0CG33 693 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 GOLGA6AQ9NYA3 693 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 TRIM21P19474 475 aaKnown RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 GNAI1P63096 354 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 PSMD2Q13200 908 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 RAB11FIP4Q86YS3 637 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 APLFQ8IW19 511 aaPredicted RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 CDK5RAP3Q96JB5 506 aa7.88□□□□□ -1.15
RBM28-201ENST00000223073 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
RBM28-201ENST00000223073 ARMC2Q8NEN0 867 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 NUCB1Q02818 461 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 IQCGQ9H095 443 aaKnown RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 NDUFAB1O14561 156 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 FAM177A1Q8N128 213 aaPredicted RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 CCDC57Q2TAC2 916 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 MPHOSPH8Q99549 860 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 PRIM1P49642 420 aaKnown RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 SLC20A2Q08357 652 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 CPLX4Q7Z7G2 160 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 ZFXP17010 805 aaPredicted RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 RNF10Q8N5U6 811 aaKnown RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 TRIM35Q9UPQ4 493 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 ST20-MTHFSA0A0A6YYL1 179 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 TSPYL2Q9H2G4 693 aaPredicted RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 CA8P35219 290 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 G3BP1Q13283 466 aaKnown RBP eCLIP7.87□□□□□ -1.15
RBM28-201ENST00000223073 SPECC1Q5M775 1068 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 INTS4Q96HW7 963 aaKnown RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
RBM28-201ENST00000223073 GFM2Q969S9 779 aaKnown RBP7.87□□□□□ -1.15
RBM28-201ENST00000223073 ERICH2A1L162 156 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 SMIM24O75264 130 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 GIGYF1O75420 1035 aaPredicted RBP7.86□□□□□ -1.15
RBM28-201ENST00000223073 HDGFP51858 240 aaKnown RBP7.86□□□□□ -1.15
RBM28-201ENST00000223073 HNRNPMP52272 730 aaKnown RBP eCLIP7.86□□□□□ -1.15
RBM28-201ENST00000223073 SART3Q15020 963 aaKnown RBP7.86□□□□□ -1.15
RBM28-201ENST00000223073 TTC19Q6DKK2 380 aaPredicted RBP7.86□□□□□ -1.15
RBM28-201ENST00000223073 CIB2O75838 187 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 CETN2P41208 172 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 MXRA7P84157 204 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 PHLDB3Q6NSJ2 640 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 STMN2Q93045 179 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 TERF2Q15554 542 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 CFAP58Q5T655 872 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 LRRC45Q96CN5 670 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 JAKMIP1Q96N16 626 aaKnown RBP7.86□□□□□ -1.15
RBM28-201ENST00000223073 MAATS1Q7Z4T9 603 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 AMOTQ4VCS5 1084 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 CEP85LQ5SZL2 805 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 ATL3Q6DD88 541 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 LCA5Q86VQ0 697 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.86□□□□□ -1.152e-8■■■■□ 26.5
RBM28-201ENST00000223073 GRIPAP1Q4V328 841 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 WASF1Q92558 559 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 PDRG1Q9NUG6 133 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 CSB-PGBD3P0DP91 1061 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 U2AF2P26368 475 aaKnown RBP eCLIP7.86□□□□□ -1.154e-7■■■□□ 17
RBM28-201ENST00000223073 TRAF1Q13077 416 aa7.86□□□□□ -1.15
RBM28-201ENST00000223073 CTNNBL1Q8WYA6 563 aaPredicted RBP7.86□□□□□ -1.15
RBM28-201ENST00000223073 ARHGAP24Q8N264 748 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 RPGRIP1Q96KN7 1286 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 ZC4H2Q9NQZ6 224 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 RIOK3O14730 519 aaKnown RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 CASQ2O14958 399 aaPredicted RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 PPP1R12AO14974 1030 aaPredicted RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 KANK4Q5T7N3 995 aaPredicted RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 CCHCR1Q8TD31 782 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 SLC4A10Q6U841 1118 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 RUFY4Q6ZNE9 571 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 CCDC77Q9BR77 488 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 FAM71BQ8TC56 605 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 RASAL2Q9UJF2 1139 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 PPP2R3AQ06190 1150 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 RPGRIP1LQ68CZ1 1315 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 ZNF830Q96NB3 372 aaPredicted RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 RMI1Q9H9A7 625 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 TPX2Q9ULW0 747 aaKnown RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 FAN1Q9Y2M0 1017 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 TPD52L2O43399 206 aaKnown RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 NFXL1Q6ZNB6 911 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 ZBTB9Q96C00 473 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 SSFA2P28290 1259 aa7.85□□□□□ -1.15
RBM28-201ENST00000223073 TMED8Q6PL24 325 aaPredicted RBP7.85□□□□□ -1.15
RBM28-201ENST00000223073 ZSCAN16Q9H4T2 348 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms