RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 UBR3Q6ZT12 1888 aa29.15■■■□□ 2.26
USF2-201ENST00000222305 ANKRD13DQ6ZTN6 518 aa29.15■■■□□ 2.26
USF2-201ENST00000222305 RIC3Q7Z5B4 369 aa29.15■■■□□ 2.26
USF2-201ENST00000222305 NUP98P52948 1817 aa29.15■■■□□ 2.26
USF2-201ENST00000222305 DEFB132Q7Z7B7 95 aa29.14■■■□□ 2.26
USF2-201ENST00000222305 EIF5P55010 431 aaKnown RBP29.13■■■□□ 2.25
USF2-201ENST00000222305 INTS3Q68E01 1043 aaKnown RBP29.13■■■□□ 2.25
USF2-201ENST00000222305 EZH2Q15910 746 aaKnown RBP29.12■■■□□ 2.25
USF2-201ENST00000222305 RC3H1Q5TC82 1133 aaKnown RBP29.12■■■□□ 2.25
USF2-201ENST00000222305 ARXQ96QS3 562 aa29.12■■■□□ 2.25
USF2-201ENST00000222305 PLBD2Q8NHP8 589 aa29.12■■■□□ 2.25
USF2-201ENST00000222305 ZBTB3Q9H5J0 574 aa29.12■■■□□ 2.25
USF2-201ENST00000222305 ANKRD36CQ5JPF3 1778 aa29.12■■■□□ 2.25
USF2-201ENST00000222305 BCORQ6W2J9 1755 aa29.12■■■□□ 2.25
USF2-201ENST00000222305 C4AP0C0L4 1744 aa29.11■■■□□ 2.25
USF2-201ENST00000222305 COL15A1P39059 1388 aa29.11■■■□□ 2.25
USF2-201ENST00000222305 GNPATO15228 680 aa29.1■■■□□ 2.25
USF2-201ENST00000222305 BAG6P46379 1132 aa29.1■■■□□ 2.25
USF2-201ENST00000222305 CCT4P50991 539 aaKnown RBP29.1■■■□□ 2.25
USF2-201ENST00000222305 KIF6Q6ZMV9 814 aa29.1■■■□□ 2.25
USF2-201ENST00000222305 NPM2Q86SE8 214 aaKnown RBP29.1■■■□□ 2.25
USF2-201ENST00000222305 DDX19BQ9UMR2 479 aa29.1■■■□□ 2.25
USF2-201ENST00000222305 TUBGCP6Q96RT7 1819 aa29.1■■■□□ 2.25
USF2-201ENST00000222305 SMIM5Q71RC9 77 aa29.09■■■□□ 2.25
USF2-201ENST00000222305 CAMKK2Q96RR4 588 aa29.09■■■□□ 2.25
USF2-201ENST00000222305 DZIP3Q86Y13 1208 aaKnown RBP29.09■■■□□ 2.25
USF2-201ENST00000222305 TBC1D2BQ9UPU7 963 aa29.09■■■□□ 2.25
USF2-201ENST00000222305 ATP10DQ9P241 1426 aa29.08■■■□□ 2.25
USF2-201ENST00000222305 BEND3Q5T5X7 828 aa29.08■■■□□ 2.25
USF2-201ENST00000222305 UPF1Q92900 1129 aaKnown RBP eCLIP29.08■■■□□ 2.25
USF2-201ENST00000222305 AK7Q96M32 723 aa29.08■■■□□ 2.25
USF2-201ENST00000222305 RPS6KA4O75676 772 aa29.07■■■□□ 2.24
USF2-201ENST00000222305 AMIGO3Q86WK7 504 aa29.07■■■□□ 2.24
USF2-201ENST00000222305 CCDC125Q86Z20 511 aa29.07■■■□□ 2.24
USF2-201ENST00000222305 METTL22Q9BUU2 404 aaPredicted RBP29.07■■■□□ 2.24
USF2-201ENST00000222305 MAP3K15Q6ZN16 1313 aa29.07■■■□□ 2.24
USF2-201ENST00000222305 ERICH6BQ5W0A0 696 aa29.06■■■□□ 2.24
USF2-201ENST00000222305 MYD88Q99836 296 aa29.06■■■□□ 2.24
USF2-201ENST00000222305 SRCIN1Q9C0H9 1055 aa29.06■■■□□ 2.24
USF2-201ENST00000222305 SCN7AQ01118 1682 aa29.06■■■□□ 2.24
USF2-201ENST00000222305 RTCBQ9Y3I0 505 aaKnown RBP29.05■■■□□ 2.24
USF2-201ENST00000222305 ZBTB7BO15156 539 aaPredicted RBP29.04■■■□□ 2.24
USF2-201ENST00000222305 CWF19L2Q2TBE0 894 aaKnown RBP29.04■■■□□ 2.24
USF2-201ENST00000222305 NEXNQ0ZGT2 675 aa29.03■■■□□ 2.24
USF2-201ENST00000222305 IGKV5-2P06315 115 aa29.02■■■□□ 2.24
USF2-201ENST00000222305 HLFQ16534 295 aa29.02■■■□□ 2.24
USF2-201ENST00000222305 LINS1Q8NG48 757 aa29.02■■■□□ 2.24
USF2-201ENST00000222305 PHF14O94880 888 aa29.02■■■□□ 2.24
USF2-201ENST00000222305 ATP5J2-PTCD1G3V325 749 aa29.01■■■□□ 2.23
USF2-201ENST00000222305 MEIS3Q99687 375 aa29.01■■■□□ 2.23
USF2-201ENST00000222305 A0A087WZG4 1122 aa29■■■□□ 2.23
USF2-201ENST00000222305 ZNF827Q17R98 1081 aa29■■■□□ 2.23
USF2-201ENST00000222305 GIGYF2Q6Y7W6 1299 aaKnown RBP29■■■□□ 2.23
USF2-201ENST00000222305 NEURL1BA8MQ27 555 aa28.99■■■□□ 2.23
USF2-201ENST00000222305 ERVV-1B6SEH8 477 aa28.99■■■□□ 2.23
USF2-201ENST00000222305 CAMTA2O94983 1202 aa28.99■■■□□ 2.23
USF2-201ENST00000222305 ZBTB40Q9NUA8 1239 aa28.99■■■□□ 2.23
USF2-201ENST00000222305 ALDH1L1O75891 902 aa28.98■■■□□ 2.23
USF2-201ENST00000222305 HMGB2P26583 209 aaKnown RBP28.98■■■□□ 2.23
USF2-201ENST00000222305 ARHGEF1Q92888 912 aaKnown RBP28.98■■■□□ 2.23
USF2-201ENST00000222305 TCIRG1Q13488 830 aa28.97■■■□□ 2.23
USF2-201ENST00000222305 AKT1S1Q96B36 256 aa28.97■■■□□ 2.23
USF2-201ENST00000222305 USP44Q9H0E7 712 aa28.97■■■□□ 2.23
USF2-201ENST00000222305 C1orf115Q9H7X2 142 aa28.97■■■□□ 2.23
USF2-201ENST00000222305 PPP4R2Q9NY27 417 aa28.97■■■□□ 2.23
USF2-201ENST00000222305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.96■■■□□ 2.23
USF2-201ENST00000222305 TRAPPC3LQ5T215 181 aa28.96■■■□□ 2.23
USF2-201ENST00000222305 CHMP4BQ9H444 224 aaKnown RBP28.96■■■□□ 2.23
USF2-201ENST00000222305 SRP68Q9UHB9 627 aaKnown RBP28.95■■■□□ 2.23
USF2-201ENST00000222305 ISCA1Q9BUE6 129 aa28.94■■■□□ 2.22
USF2-201ENST00000222305 NARFQ9UHQ1 456 aa28.94■■■□□ 2.22
USF2-201ENST00000222305 SSFA2P28290 1259 aa28.94■■■□□ 2.22
USF2-201ENST00000222305 AAMPQ13685 434 aa28.94■■■□□ 2.22
USF2-201ENST00000222305 GCKRQ14397 625 aa28.94■■■□□ 2.22
USF2-201ENST00000222305 NBPF7P0C2Y1 421 aaPredicted RBP28.93■■■□□ 2.22
USF2-201ENST00000222305 ADRA2BP18089 450 aa28.93■■■□□ 2.22
USF2-201ENST00000222305 GPTP24298 496 aa28.93■■■□□ 2.22
USF2-201ENST00000222305 HSP90AB3PQ58FF7 597 aa28.93■■■□□ 2.22
USF2-201ENST00000222305 USPL1Q5W0Q7 1092 aa28.93■■■□□ 2.22
USF2-201ENST00000222305 ANO8Q9HCE9 1232 aaPredicted RBP28.93■■■□□ 2.22
USF2-201ENST00000222305 TFCP2L1Q9NZI6 479 aa28.93■■■□□ 2.22
USF2-201ENST00000222305 QSER1Q2KHR3 1735 aa28.92■■■□□ 2.22
USF2-201ENST00000222305 RFC4P35249 363 aa28.92■■■□□ 2.22
USF2-201ENST00000222305 C9orf78Q9NZ63 289 aaPredicted RBP28.92■■■□□ 2.22
USF2-201ENST00000222305 ZPR1O75312 459 aa28.91■■■□□ 2.22
USF2-201ENST00000222305 B4GALNT3Q6L9W6 998 aa28.91■■■□□ 2.22
USF2-201ENST00000222305 PCDHB15Q9Y5E8 787 aa28.91■■■□□ 2.22
USF2-201ENST00000222305 USP42Q9H9J4 1324 aaKnown RBP28.91■■■□□ 2.22
USF2-201ENST00000222305 GRM8O00222 908 aa28.91■■■□□ 2.22
USF2-201ENST00000222305 GNAI3P08754 354 aa28.91■■■□□ 2.22
USF2-201ENST00000222305 BCL2L12Q9HB09 334 aa28.91■■■□□ 2.22
USF2-201ENST00000222305 CWC25Q9NXE8 425 aaPredicted RBP28.91■■■□□ 2.22
USF2-201ENST00000222305 IBTKQ9P2D0 1353 aaPredicted RBP28.9■■■□□ 2.22
USF2-201ENST00000222305 UBTFL1P0CB47 393 aaPredicted RBP28.9■■■□□ 2.22
USF2-201ENST00000222305 CCDC191Q8NCU4 936 aa28.9■■■□□ 2.22
USF2-201ENST00000222305 ZNF652Q9Y2D9 606 aa28.9■■■□□ 2.22
USF2-201ENST00000222305 JARID2Q92833 1246 aaPredicted RBP28.89■■■□□ 2.22
USF2-201ENST00000222305 CCDC136Q96JN2 1154 aa28.89■■■□□ 2.22
USF2-201ENST00000222305 UBN2Q6ZU65 1347 aa28.89■■■□□ 2.21
USF2-201ENST00000222305 ZNF34Q8IZ26 560 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms